STRINGSTRING
CFU_1658 CFU_1658 CFU_1659 CFU_1659 emrB emrB emrA emrA CFU_1662 CFU_1662 CFU_1663 CFU_1663 CFU_1664 CFU_1664 CFU_2475 CFU_2475 CFU_2476 CFU_2476 emrA2 emrA2 emrB2 emrB2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CFU_1658Hypothetical protein. (60 aa)
CFU_1659Putative transcription regulator protein. (148 aa)
emrBInner membrane component of tripartite multidrug resistance system; Belongs to the major facilitator superfamily. (512 aa)
emrAMembrane fusion component of tripartite multidrug resistance system. (396 aa)
CFU_1662Outer membrane component of tripartite multidrug resistance system. (488 aa)
CFU_1663Transcriptional regulator, TetR family. (199 aa)
CFU_1664Phosphoesterase PHP, N-terminal. (276 aa)
CFU_2475Transcriptional regulator, MarR family. (157 aa)
CFU_2476Outer membrane component of tripartite multidrug resistance system. (517 aa)
emrA2Membrane fusion component of tripartite multidrug resistance system. (405 aa)
emrB2Inner membrane component of tripartite multidrug resistance system; Belongs to the major facilitator superfamily. (525 aa)
Your Current Organism:
Collimonas fungivorans
NCBI taxonomy Id: 1005048
Other names: C. fungivorans Ter331, Collimonas fungivorans Ter331, Collimonas fungivorans str. Ter331, Collimonas fungivorans strain Ter331, beta proteobacterium Ter331
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