STRINGSTRING
hlyB hlyB CFU_1829 CFU_1829 hlyD hlyD frpC frpC CFU_2673 CFU_2673 cyaB cyaB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hlyBPutative ABC transporter. (746 aa)
CFU_1829Calcium binding hemolysin protein, putative. (2795 aa)
hlyDType I secretion membrane fusion protein, HlyD. (459 aa)
frpCPutative outer membrane adhesin like protein. (787 aa)
CFU_2673Putative HlyD family secretion protein. (480 aa)
cyaBHlyB/MsbA family ABC transporter. (720 aa)
Your Current Organism:
Collimonas fungivorans
NCBI taxonomy Id: 1005048
Other names: C. fungivorans Ter331, Collimonas fungivorans Ter331, Collimonas fungivorans str. Ter331, Collimonas fungivorans strain Ter331, beta proteobacterium Ter331
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