STRINGSTRING
CFU_0183 CFU_0183 CFU_0184 CFU_0184 CFU_0239 CFU_0239 qseC qseC qseB qseB CFU_0242 CFU_0242 CFU_0244 CFU_0244 CFU_0479 CFU_0479 CFU_0973 CFU_0973 CFU_0976 CFU_0976 CFU_0977 CFU_0977 CFU_1124 CFU_1124 CFU_1174 CFU_1174 CFU_1186 CFU_1186 CFU_1187 CFU_1187 CFU_1188 CFU_1188 CFU_1193 CFU_1193 CFU_1194 CFU_1194 CFU_1197 CFU_1197 CFU_1198 CFU_1198 CFU_1243 CFU_1243 CFU_1244 CFU_1244 CFU_1534 CFU_1534 CFU_1535 CFU_1535 envZ envZ ompR ompR CFU_1795 CFU_1795 CFU_1810 CFU_1810 pilZ pilZ hrpX hrpX CFU_1859 CFU_1859 CFU_1945 CFU_1945 CFU_1982 CFU_1982 CFU_1983 CFU_1983 divK divK CFU_1985 CFU_1985 CFU_2306 CFU_2306 CFU_2473 CFU_2473 CFU_2474 CFU_2474 phoR phoR phoB phoB phoR2 phoR2 phoB2 phoB2 CFU_2527 CFU_2527 CFU_2528 CFU_2528 CFU_2602 CFU_2602 gltR gltR uhpA uhpA CFU_2646 CFU_2646 CFU_2839 CFU_2839 torS torS CFU_2841 CFU_2841 CFU_2842 CFU_2842 qseB2 qseB2 ygiY ygiY CFU_3169 CFU_3169 CFU_3287 CFU_3287 qseB3 qseB3 qseC2 qseC2 CFU_3346 CFU_3346 ygiX ygiX CFU_3415 CFU_3415 CFU_3423 CFU_3423 vsrD vsrD bvgS bvgS bvgA bvgA vieA vieA rpeA rpeA CFU_3677 CFU_3677 CFU_3821 CFU_3821 CFU_3822 CFU_3822 CFU_3823 CFU_3823 CFU_3824 CFU_3824 CFU_3956 CFU_3956 CFU_4294 CFU_4294 CFU_4310 CFU_4310 hrpG hrpG CFU_4367 CFU_4367 rcsB rcsB tctD tctD tctE tctE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CFU_0183DNA-binding heavy metal response regulator. (226 aa)
CFU_0184Sensor kinase protein; Member of a two-component regulatory system. (470 aa)
CFU_0239Hypothetical protein. (347 aa)
qseCSensory histidine kinase. (449 aa)
qseBTwo-component system response regulator. (225 aa)
CFU_0242TonB-dependent receptor. (722 aa)
CFU_0244Hypothetical protein. (228 aa)
CFU_0479GGDEF family protein. (1022 aa)
CFU_0973Two Component Transcriptional Regulator, LuxR family. (217 aa)
CFU_0976Signal transduction histidine kinase. (574 aa)
CFU_0977Sensory box histidine kinase/response regulator. (231 aa)
CFU_1124Hypothetical protein. (590 aa)
CFU_1174Conserved hypothetical protein; putative signal peptide. (946 aa)
CFU_1186Hypothetical protein. (241 aa)
CFU_1187Two-component response regulator. (330 aa)
CFU_1188Periplasmic sensor signal transduction histidine kinase. (455 aa)
CFU_1193Signal transduction histidine kinase. (446 aa)
CFU_1194Putative response regulator transcription regulator protein. (238 aa)
CFU_1197Periplasmic sensor signal transduction histidine kinase. (466 aa)
CFU_1198Two-component response regulator. (224 aa)
CFU_1243Heavy metal sensor histidine kinase; Member of a two-component regulatory system. (465 aa)
CFU_1244DNA-binding heavy metal response regulator. (229 aa)
CFU_1534Two-component system, OmpR family, response regulator; Response regulators consisting of a CheY-like receiver domain protein and a winged-helix DNA-binding domain protein. (222 aa)
CFU_1535ATP-binding region, ATPase-like:Histidine kinase. (349 aa)
envZOsmolarity sensory histidine kinase. (470 aa)
ompRTwo-component system response regulator. (251 aa)
CFU_1795Hypothetical protein. (96 aa)
CFU_1810Diguanylate cyclase/phosphodiesterase. (1021 aa)
pilZType IV pilus biogenesis protein. (130 aa)
hrpXPAS/PAC sensor signal transduction histidine kinase. (984 aa)
CFU_1859Putative GGDEF domain protein. (521 aa)
CFU_1945Putative signal transduction protein. (937 aa)
CFU_1982Putative signal-transduction protein with CBS domains. (151 aa)
CFU_1983Periplasmic sensor hybrid histidine kinase. (567 aa)
divKPutative two component transcriptional regulator. (119 aa)
CFU_1985Hypothetical protein. (142 aa)
CFU_2306Putative diguanylate cyclase (GGDEF domain). (634 aa)
CFU_2473Putative response regulator protein. (224 aa)
CFU_2474Histidine kinase. (469 aa)
phoRPhosphate regulon sensor protein phoR. (451 aa)
phoBPhosphate regulon transcriptional regulatory protein. (234 aa)
phoR2Phosphate regulon sensor protein. (434 aa)
phoB2Phosphate regulon transcriptional regulatory protein. (229 aa)
CFU_2527Putative response regulator for cobalt zinc cadmium resistance transcription regulator protein. (223 aa)
CFU_2528Signal transduction histidine kinase; Member of a two-component regulatory system. (393 aa)
CFU_2602Putative Signal transduction histidine kinase. (504 aa)
gltRTwo component transcriptional regulator, winged helix family. (236 aa)
uhpADNA-binding response regulator, LuxR family, near polyamine transporter. (210 aa)
CFU_2646GGDEF family protein. (998 aa)
CFU_2839Two-component system regulatory protein. (179 aa)
torSTwo-component system sensor protein. (634 aa)
CFU_2841Putative transcriptional regulator, LuxR family. (257 aa)
CFU_2842Hypothetical protein. (178 aa)
qseB2Two-component system response regulator QseB. (221 aa)
ygiYPeriplasmic sensor signal transduction histidine kinase. (458 aa)
CFU_3169Multi-sensor signal transduction histidine kinase. (464 aa)
CFU_3287Sensory box/GGDEF family protein. (563 aa)
qseB3Two-component system response regulator QseB. (218 aa)
qseC2Sensory histidine kinase QseC. (437 aa)
CFU_3346Integral membrane sensor signal transduction histidine kinase. (464 aa)
ygiXTwo component transcriptional regulator, winged helix family. (233 aa)
CFU_3415Diguanylate cyclase (GGDEF domain). (487 aa)
CFU_3423Putative regulator; putative membrane protein. (737 aa)
vsrDResponse regulator protein VsrD (LuxRfamily). (210 aa)
bvgSHybrid sensory histidine kinase in two-component regulatory system with EvgA. (1229 aa)
bvgADNA-binding response regulator, LuxR family. (208 aa)
vieAPutative two-component response regulator. (445 aa)
rpeAPutative transmembrane sensor kinase transcriptional regulator protein. (144 aa)
CFU_3677Putative sensor/response regulator hybrid. (722 aa)
CFU_3821Two-component system, OmpR family, response regulator; Response regulators consisting of a CheY-like receiver domain protein and a winged-helix DNA-binding domain protein. (247 aa)
CFU_3822Putative two-component sensor kinase transcriptional regulatory protein. (518 aa)
CFU_3823Conserved hypothetical protein. (101 aa)
CFU_3824Sodium:solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (678 aa)
CFU_3956GGDEF domain protein. (376 aa)
CFU_4294Putative diguanylate cyclase (GGDEF). (376 aa)
CFU_4310GGDEF family protein. (1008 aa)
hrpGHrpG. (257 aa)
CFU_4367Two component transcriptional regulator, LuxR family. (215 aa)
rcsBDNA-binding response regulator. (232 aa)
tctDDNA-binding response regulator TctD. (227 aa)
tctEIntegral membrane sensor signal transduction histidine kinase. (502 aa)
Your Current Organism:
Collimonas fungivorans
NCBI taxonomy Id: 1005048
Other names: C. fungivorans Ter331, Collimonas fungivorans Ter331, Collimonas fungivorans str. Ter331, Collimonas fungivorans strain Ter331, beta proteobacterium Ter331
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.