STRINGSTRING
CFU_0976 CFU_0976 CFU_1193 CFU_1193 CFU_1194 CFU_1194 CFU_1197 CFU_1197 CFU_1198 CFU_1198 CFU_1534 CFU_1534 CFU_1535 CFU_1535 CFU_2473 CFU_2473 CFU_2474 CFU_2474 phoR phoR phoB phoB phoR2 phoR2 phoB2 phoB2 rpeA rpeA tctD tctD tctE tctE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CFU_0976Signal transduction histidine kinase. (574 aa)
CFU_1193Signal transduction histidine kinase. (446 aa)
CFU_1194Putative response regulator transcription regulator protein. (238 aa)
CFU_1197Periplasmic sensor signal transduction histidine kinase. (466 aa)
CFU_1198Two-component response regulator. (224 aa)
CFU_1534Two-component system, OmpR family, response regulator; Response regulators consisting of a CheY-like receiver domain protein and a winged-helix DNA-binding domain protein. (222 aa)
CFU_1535ATP-binding region, ATPase-like:Histidine kinase. (349 aa)
CFU_2473Putative response regulator protein. (224 aa)
CFU_2474Histidine kinase. (469 aa)
phoRPhosphate regulon sensor protein phoR. (451 aa)
phoBPhosphate regulon transcriptional regulatory protein. (234 aa)
phoR2Phosphate regulon sensor protein. (434 aa)
phoB2Phosphate regulon transcriptional regulatory protein. (229 aa)
rpeAPutative transmembrane sensor kinase transcriptional regulator protein. (144 aa)
tctDDNA-binding response regulator TctD. (227 aa)
tctEIntegral membrane sensor signal transduction histidine kinase. (502 aa)
Your Current Organism:
Collimonas fungivorans
NCBI taxonomy Id: 1005048
Other names: C. fungivorans Ter331, Collimonas fungivorans Ter331, Collimonas fungivorans str. Ter331, Collimonas fungivorans strain Ter331, beta proteobacterium Ter331
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