STRINGSTRING
CFU_1197 CFU_1197 CFU_1198 CFU_1198 CFU_2473 CFU_2473 CFU_2474 CFU_2474 tctD tctD tctE tctE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CFU_1197Periplasmic sensor signal transduction histidine kinase. (466 aa)
CFU_1198Two-component response regulator. (224 aa)
CFU_2473Putative response regulator protein. (224 aa)
CFU_2474Histidine kinase. (469 aa)
tctDDNA-binding response regulator TctD. (227 aa)
tctEIntegral membrane sensor signal transduction histidine kinase. (502 aa)
Your Current Organism:
Collimonas fungivorans
NCBI taxonomy Id: 1005048
Other names: C. fungivorans Ter331, Collimonas fungivorans Ter331, Collimonas fungivorans str. Ter331, Collimonas fungivorans strain Ter331, beta proteobacterium Ter331
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