STRINGSTRING
bga bga CFU_0132 CFU_0132 CFU_0133 CFU_0133 purR purR malK malK bga6 bga6 yurO yurO CFU_0298 CFU_0298 CFU_0299 CFU_0299 pglA pglA ugpE ugpE ugpA ugpA ugpB ugpB CFU_0336 CFU_0336 glmS glmS glmU glmU CFU_0618 CFU_0618 CFU_0619 CFU_0619 ptsK ptsK ptsN ptsN CFU_0668 CFU_0668 slyA slyA CFU_0677 CFU_0677 CFU_0693 CFU_0693 CFU_0694 CFU_0694 CFU_0695 CFU_0695 CFU_0696 CFU_0696 CFU_0743 CFU_0743 CFU_0745 CFU_0745 xylB xylB dalD dalD CFU_1098 CFU_1098 CFU_1099 CFU_1099 CFU_1100 CFU_1100 smoF smoF smoE smoE smoC smoC ugpC ugpC ugpE2 ugpE2 ugpA2 ugpA2 ugpB2 ugpB2 xynB xynB CFU_1361 CFU_1361 CFU_1440 CFU_1440 CFU_1441 CFU_1441 CFU_1442 CFU_1442 CFU_1443 CFU_1443 CFU_1444 CFU_1444 CFU_1449 CFU_1449 CFU_1450 CFU_1450 CFU_1451 CFU_1451 xylB2 xylB2 CFU_1833 CFU_1833 mrsA mrsA CFU_2604 CFU_2604 CFU_2605 CFU_2605 CFU_2606 CFU_2606 CFU_2607 CFU_2607 CFU_2608 CFU_2608 nagK2 nagK2 nagA2 nagA2 nagB2 nagB2 CFU_2612 CFU_2612 CFU_2613 CFU_2613 CFU_2653 CFU_2653 CFU_2654 CFU_2654 celA celA hexII hexII xylB3 xylB3 CFU_2950 CFU_2950 CFU_2952 CFU_2952 chiI chiI CFU_2976 CFU_2976 chiII chiII CFU_2978 CFU_2978 CFU_2979 CFU_2979 hexI hexI nagB1 nagB1 nagA1-3 nagA1-3 nagA1-5 nagA1-5 nagQ nagQ nagK1 nagK1 xylA xylA xylR xylR galM galM CFU_4151 CFU_4151 ptsI ptsI ptsH ptsH manX manX gntR gntR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bgaBeta-galactosidase; Belongs to the glycosyl hydrolase 35 family. (997 aa)
CFU_01325-oxo-L-prolinase, putative. (369 aa)
CFU_0133Lipolytic enzyme, G-D-S-L. (424 aa)
purRTranscriptional regulator, LacI family. (356 aa)
malKMaltose/maltodextrin transport ATP-binding protein; Belongs to the ABC transporter superfamily. (379 aa)
bga6Beta-galactosidase. (688 aa)
yurOExtracellular solute-binding protein, family 1. (412 aa)
CFU_0298N-Acetyl-D-glucosamine ABC transport system, permease protein. (310 aa)
CFU_0299Binding-protein-dependent transport systems inner membrane component. (283 aa)
pglAPolygalacturonase precursor (PGA) (Pectinase); Belongs to the glycosyl hydrolase 28 family. (611 aa)
ugpESN-glycerol-3-phosphate transport system permease protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (305 aa)
ugpASN-glycerol-3-phosphate transport system permease protein. (296 aa)
ugpBGlycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein. (439 aa)
CFU_0336Transcriptional regulator, LacI family. (374 aa)
glmSGlucosamine--fructose-6-phosphate aminotransferase isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (605 aa)
glmUN-acetylglucosamine-1-phosphate uridyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (455 aa)
CFU_0618Hypothetical protein. (208 aa)
CFU_0619Hypothetical ATP-binding protein UPF0042, contains P-loop; Displays ATPase and GTPase activities. (293 aa)
ptsKHPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). (315 aa)
ptsNPTS system nitrogen-specific IIA component, PtsN. (166 aa)
CFU_0668Transposase. (476 aa)
slyAMarR family transcriptional regulatory protein. (181 aa)
CFU_0677Monooxygenase. (370 aa)
CFU_0693Alpha-1,2-mannosidase. (1088 aa)
CFU_0694Alpha-1,2-mannosidase. (867 aa)
CFU_0695D-mannose isomerase. (406 aa)
CFU_0696Transcriptional regulator, LacI family. (331 aa)
CFU_0743Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family. (804 aa)
CFU_0745Conserved hypothetical protein. (321 aa)
xylBXylulose kinase. (496 aa)
dalDD-arabinitol 4-dehydrogenase. (469 aa)
CFU_1098Various polyols ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily. (380 aa)
CFU_1099Phosphoglycolate phosphatase. (233 aa)
CFU_1100Various polyols ABC transporter, permease component 2. (271 aa)
smoFHypothetical protein. (309 aa)
smoEABC sugar transporter, periplasmic ligand binding protein. (472 aa)
smoCTranscriptional regulator. (319 aa)
ugpCSN-glycerol-3-phosphate transport ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (370 aa)
ugpE2SN-glycerol-3-phosphate transport system permease protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (283 aa)
ugpA2SN-glycerol-3-phosphate transport system permease protein. (315 aa)
ugpB2Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein. (435 aa)
xynBTwin-arginine translocation pathway signal sequence domain protein. (315 aa)
CFU_1361Conserved protein, glycosyl hydrolase family. (1162 aa)
CFU_1440Maltose ABC transporter, ATP-binding protein, putative. (381 aa)
CFU_1441Maltose ABC transporter, permease protein, putative. (297 aa)
CFU_1442ABC transporter, membrane permease. (338 aa)
CFU_1443Conserved hypothetical protein. (414 aa)
CFU_1444ABC-type sugar transport system, periplasmic component. (417 aa)
CFU_1449PfkB domain protein; Belongs to the carbohydrate kinase PfkB family. (322 aa)
CFU_1450D-mannose isomerase. (410 aa)
CFU_1451Putative transcriptional regulator. (286 aa)
xylB2Xylulose kinase; Belongs to the FGGY kinase family. (538 aa)
CFU_1833alpha-L-arabinofuranosidase. (504 aa)
mrsAPhosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. (445 aa)
CFU_2604ABC-type sugar transport system, periplasmic component. (466 aa)
CFU_2605N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein. (420 aa)
CFU_2606N-Acetyl-D-glucosamine ABC transport system, permease protein 1. (326 aa)
CFU_2607N-Acetyl-D-glucosamine ABC transport system, permease protein 2. (295 aa)
CFU_2608N-Acetyl-D-glucosamine ABC transport system, ATP-binding component; Belongs to the ABC transporter superfamily. (373 aa)
nagK2N-acetylglucosamine kinase. (321 aa)
nagA2N-acetylglucosamine-6-phosphate deacetylase. (373 aa)
nagB2Sugar isomerase. (340 aa)
CFU_2612Oxidoreductase-like protein. (329 aa)
CFU_2613Conserved hypothetical protein. (189 aa)
CFU_2653Hypothetical protein. (112 aa)
CFU_2654Coagulation factor 5/8 type domain protein. (952 aa)
celANeuraminidase (sialidase). (825 aa)
hexIIN-acetylhexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. (349 aa)
xylB3Xylulose kinase. (494 aa)
CFU_2950LacI-family transcriptional regulator. (332 aa)
CFU_2952Hypothetical protein. (384 aa)
chiIChitinase ChiI. (434 aa)
CFU_2976Hypothetical protein. (122 aa)
chiIIChitinase ChiII; Belongs to the glycosyl hydrolase 18 family. (386 aa)
CFU_2978Putative hydrolase. (306 aa)
CFU_2979Putative signal transducer. (433 aa)
hexIN-acetylhexosaminidase. (521 aa)
nagB1Sugar isomeraese. (345 aa)
nagA1-3N-acetylglucosamine-6-phosphate deacetylase. (112 aa)
nagA1-5N-acetylglucosamine-6-phosphate deacetylase. (289 aa)
nagQPutative transcriptional regulator of N-Acetylglucosamine utilization, GntR family. (244 aa)
nagK1N-acetylglucosamine kinase. (331 aa)
xylAXylose isomerase; Belongs to the xylose isomerase family. (438 aa)
xylRXylose activator XylR (AraC family). (408 aa)
galMD-xylose-specific 1-epimerase (mutarotase); Converts alpha-aldose to the beta-anomer. (355 aa)
CFU_4151AmpG-like permease. (418 aa)
ptsIPhosphoenolpyruvate-protein phosphotransferase of PTS system; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). (627 aa)
ptsHPhosphocarrier protein, nitrogen regulation associated. (106 aa)
manXPutative Phosphotransferase, mannose/fructose-specific component IIA family protein. (134 aa)
gntRGluconate utilization system Gnt-I transcriptional repressor. (350 aa)
Your Current Organism:
Collimonas fungivorans
NCBI taxonomy Id: 1005048
Other names: C. fungivorans Ter331, Collimonas fungivorans Ter331, Collimonas fungivorans str. Ter331, Collimonas fungivorans strain Ter331, beta proteobacterium Ter331
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