STRINGSTRING
CFU_1440 CFU_1440 malK malK CFU_2608 CFU_2608 ugpC ugpC CFU_1098 CFU_1098
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CFU_1440Maltose ABC transporter, ATP-binding protein, putative. (381 aa)
malKMaltose/maltodextrin transport ATP-binding protein; Belongs to the ABC transporter superfamily. (379 aa)
CFU_2608N-Acetyl-D-glucosamine ABC transport system, ATP-binding component; Belongs to the ABC transporter superfamily. (373 aa)
ugpCSN-glycerol-3-phosphate transport ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (370 aa)
CFU_1098Various polyols ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily. (380 aa)
Your Current Organism:
Collimonas fungivorans
NCBI taxonomy Id: 1005048
Other names: C. fungivorans Ter331, Collimonas fungivorans Ter331, Collimonas fungivorans str. Ter331, Collimonas fungivorans strain Ter331, beta proteobacterium Ter331
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