40 items (Collimonas fungivorans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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gene fusions

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Your Input:
	CFU_4377	Arabinose efflux permease. (390 aa)
	CFU_0266	Putative transporter. (489 aa)
	malK	Maltose/maltodextrin transport ATP-binding protein; Belongs to the ABC transporter superfamily. (379 aa)
	CFU_0299	Binding-protein-dependent transport systems inner membrane component. (283 aa)
	CFU_0342	Hypothetical protein. (341 aa)
	ptsN	PTS system nitrogen-specific IIA component, PtsN. (166 aa)
	CFU_1098	Various polyols ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily. (380 aa)
	CFU_1190	Conserved hypothetical protein. (187 aa)
	ugpC	SN-glycerol-3-phosphate transport ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family. (370 aa)
	chvE	Sugar ABC transporter, periplasmic sugar-binding protein. (354 aa)
	gguA	Sugar ABC transporter. (512 aa)
	gguC	Protein of unknown function DUF1238. (331 aa)
	CFU_1440	Maltose ABC transporter, ATP-binding protein, putative. (381 aa)
	CFU_1441	Maltose ABC transporter, permease protein, putative. (297 aa)
	rbsB	ABC sugar transporter, periplasmic ligand binding protein. (337 aa)
	rbsA	Ribose ABC transport system, ATP-binding protein RbsA. (495 aa)
	CFU_1937	ABC sugar transporter, periplasmic ligand binding protein. (356 aa)
	CFU_1939	Putative ABC transporter. (260 aa)
	wza	Polysaccharide export protein. (377 aa)
	rbsA-2	Putative fucose ABC transporter, ATP-binding component; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (524 aa)
	CFU_2104	Putative fucose ABC transporter, substrate-binding component. (327 aa)
	CFU_2189	ABC-type sugar transport system, ATP-binding protein. (564 aa)
	CFU_2190	ABC sugar transporter, periplasmic ligand binding protein. (336 aa)
	ytfR	Putative ABC transporter. (518 aa)
	ytfQ	Periplasmic binding protein/LacI transcriptional regulator. (326 aa)
	CFU_2566	Putative sugar ABC transporter, substrate-binding protein. (368 aa)
	CFU_2581	DNA-binding protein. (255 aa)
	lamB	Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein). (412 aa)
	CFU_2608	N-Acetyl-D-glucosamine ABC transport system, ATP-binding component; Belongs to the ABC transporter superfamily. (373 aa)
	CFU_2736	Capsule polysaccharide export protein. (272 aa)
	CFU_2951	Periplasmic binding protein/LacI transcriptional regulator. (327 aa)
	CFU_2954	ABC transporter related protein. (515 aa)
	xylG	D-xylose transport ATP-binding protein xylG; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family. (528 aa)
	xylF	Xylose ABC transporter, periplasmic xylose-binding protein xylF. (338 aa)
	ydhP	Major facilitator superfamily MFS_1. (401 aa)
	rbsA2	Ribose ABC transport system, ATP-binding protein RbsA. (533 aa)
	rbsB2	Ribose ABC transport system, periplasmic ribose-binding protein RbsB. (367 aa)
	ptsI	Phosphoenolpyruvate-protein phosphotransferase of PTS system; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). (627 aa)
	ptsH	Phosphocarrier protein, nitrogen regulation associated. (106 aa)
	manX	Putative Phosphotransferase, mannose/fructose-specific component IIA family protein. (134 aa)

Your Current Organism:

Collimonas fungivorans

NCBI taxonomy Id: 1005048
Other names: C. fungivorans Ter331, Collimonas fungivorans Ter331, Collimonas fungivorans str. Ter331, Collimonas fungivorans strain Ter331, beta proteobacterium Ter331

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CFU_0299	CFU_1098	CFU_0299	CFU_1098	Binding-protein-dependent transport systems inner membrane component.	Various polyols ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.	0.873
CFU_0299	CFU_1440	CFU_0299	CFU_1440	Binding-protein-dependent transport systems inner membrane component.	Maltose ABC transporter, ATP-binding protein, putative.	0.874
CFU_0299	CFU_2608	CFU_0299	CFU_2608	Binding-protein-dependent transport systems inner membrane component.	N-Acetyl-D-glucosamine ABC transport system, ATP-binding component; Belongs to the ABC transporter superfamily.	0.872
CFU_0299	malK	CFU_0299	CFU_0295	Binding-protein-dependent transport systems inner membrane component.	Maltose/maltodextrin transport ATP-binding protein; Belongs to the ABC transporter superfamily.	0.922
CFU_0299	ugpC	CFU_0299	CFU_1202	Binding-protein-dependent transport systems inner membrane component.	SN-glycerol-3-phosphate transport ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.	0.874
CFU_0342	CFU_1939	CFU_0342	CFU_1939	Hypothetical protein.	Putative ABC transporter.	0.522
CFU_0342	gguA	CFU_0342	CFU_1304	Hypothetical protein.	Sugar ABC transporter.	0.444
CFU_1098	CFU_0299	CFU_1098	CFU_0299	Various polyols ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.	Binding-protein-dependent transport systems inner membrane component.	0.873
CFU_1098	CFU_1441	CFU_1098	CFU_1441	Various polyols ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.	Maltose ABC transporter, permease protein, putative.	0.794
CFU_1098	lamB	CFU_1098	CFU_2596	Various polyols ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.	Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein).	0.401
CFU_1098	malK	CFU_1098	CFU_0295	Various polyols ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.	Maltose/maltodextrin transport ATP-binding protein; Belongs to the ABC transporter superfamily.	0.905
CFU_1440	CFU_0299	CFU_1440	CFU_0299	Maltose ABC transporter, ATP-binding protein, putative.	Binding-protein-dependent transport systems inner membrane component.	0.874
CFU_1440	CFU_1441	CFU_1440	CFU_1441	Maltose ABC transporter, ATP-binding protein, putative.	Maltose ABC transporter, permease protein, putative.	0.987
CFU_1440	CFU_2608	CFU_1440	CFU_2608	Maltose ABC transporter, ATP-binding protein, putative.	N-Acetyl-D-glucosamine ABC transport system, ATP-binding component; Belongs to the ABC transporter superfamily.	0.907
CFU_1440	lamB	CFU_1440	CFU_2596	Maltose ABC transporter, ATP-binding protein, putative.	Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein).	0.401
CFU_1441	CFU_1098	CFU_1441	CFU_1098	Maltose ABC transporter, permease protein, putative.	Various polyols ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.	0.794
CFU_1441	CFU_1440	CFU_1441	CFU_1440	Maltose ABC transporter, permease protein, putative.	Maltose ABC transporter, ATP-binding protein, putative.	0.987
CFU_1441	CFU_2608	CFU_1441	CFU_2608	Maltose ABC transporter, permease protein, putative.	N-Acetyl-D-glucosamine ABC transport system, ATP-binding component; Belongs to the ABC transporter superfamily.	0.958
CFU_1441	malK	CFU_1441	CFU_0295	Maltose ABC transporter, permease protein, putative.	Maltose/maltodextrin transport ATP-binding protein; Belongs to the ABC transporter superfamily.	0.792
CFU_1441	ugpC	CFU_1441	CFU_1202	Maltose ABC transporter, permease protein, putative.	SN-glycerol-3-phosphate transport ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.	0.780

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