STRINGSTRING
CFU_0299 CFU_0299 metI metI proV2 proV2 CFU_2607 CFU_2607 yaeE yaeE CFU_1441 CFU_1441 ugpE2 ugpE2 CFU_1100 CFU_1100 ugpE ugpE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CFU_0299Binding-protein-dependent transport systems inner membrane component. (283 aa)
metIMethionine ABC transporter permease protein. (217 aa)
proV2L-proline Glycine Betaine ABC transport ATP-binding protein proV. (396 aa)
CFU_2607N-Acetyl-D-glucosamine ABC transport system, permease protein 2. (295 aa)
yaeEMethionine ABC transporter permease protein. (219 aa)
CFU_1441Maltose ABC transporter, permease protein, putative. (297 aa)
ugpE2SN-glycerol-3-phosphate transport system permease protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (283 aa)
CFU_1100Various polyols ABC transporter, permease component 2. (271 aa)
ugpESN-glycerol-3-phosphate transport system permease protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (305 aa)
Your Current Organism:
Collimonas fungivorans
NCBI taxonomy Id: 1005048
Other names: C. fungivorans Ter331, Collimonas fungivorans Ter331, Collimonas fungivorans str. Ter331, Collimonas fungivorans strain Ter331, beta proteobacterium Ter331
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