STRINGSTRING
torS torS algZ algZ CFU_3016 CFU_3016 ygiY ygiY CFU_3169 CFU_3169 qseC2 qseC2 CFU_3346 CFU_3346 CFU_3423 CFU_3423 ntrB ntrB mutL mutL tctE tctE CFU_4310 CFU_4310 CFU_4288 CFU_4288 creC creC bvgS bvgS rpeA rpeA CFU_3677 CFU_3677 CFU_3762 CFU_3762 CFU_3822 CFU_3822 pilS pilS CFU_3912 CFU_3912 envZ envZ hrpX hrpX CFU_1983 CFU_1983 CFU_2199 CFU_2199 CFU_2202 CFU_2202 dctB dctB CFU_2371 CFU_2371 CFU_2474 CFU_2474 phoR phoR phoR2 phoR2 CFU_2528 CFU_2528 parE parE htpG htpG CFU_2602 CFU_2602 cusS cusS CFU_2646 CFU_2646 CFU_2931 CFU_2931 gyrB gyrB CFU_0154 CFU_0154 CFU_0184 CFU_0184 qseC qseC CFU_0479 CFU_0479 atoS atoS CFU_0763 CFU_0763 cheA cheA CFU_0976 CFU_0976 cheA2 cheA2 CFU_1156 CFU_1156 CFU_1188 CFU_1188 CFU_1193 CFU_1193 CFU_1197 CFU_1197 CFU_1243 CFU_1243 kdpD kdpD CFU_1535 CFU_1535
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
torSTwo-component system sensor protein. (634 aa)
algZTwo-component system sensor ATPase precursor. (372 aa)
CFU_3016Hypothetical protein. (469 aa)
ygiYPeriplasmic sensor signal transduction histidine kinase. (458 aa)
CFU_3169Multi-sensor signal transduction histidine kinase. (464 aa)
qseC2Sensory histidine kinase QseC. (437 aa)
CFU_3346Integral membrane sensor signal transduction histidine kinase. (464 aa)
CFU_3423Putative regulator; putative membrane protein. (737 aa)
ntrBNitrogen regulation protein NR(II). (427 aa)
mutLDNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (621 aa)
tctEIntegral membrane sensor signal transduction histidine kinase. (502 aa)
CFU_4310GGDEF family protein. (1008 aa)
CFU_4288Sensor histidine kinase. (456 aa)
creCTwo-component response regulator CreC. (479 aa)
bvgSHybrid sensory histidine kinase in two-component regulatory system with EvgA. (1229 aa)
rpeAPutative transmembrane sensor kinase transcriptional regulator protein. (144 aa)
CFU_3677Putative sensor/response regulator hybrid. (722 aa)
CFU_3762Two-component sensor histidine kinase. (690 aa)
CFU_3822Putative two-component sensor kinase transcriptional regulatory protein. (518 aa)
pilSTwo-component sensor PilS. (578 aa)
CFU_3912Putative Two-component system sensor histidine kinase. (799 aa)
envZOsmolarity sensory histidine kinase. (470 aa)
hrpXPAS/PAC sensor signal transduction histidine kinase. (984 aa)
CFU_1983Periplasmic sensor hybrid histidine kinase. (567 aa)
CFU_2199Signal transduction histidine kinase. (486 aa)
CFU_2202Putative Two-component sensor. (459 aa)
dctBTransporter. (663 aa)
CFU_2371CheA signal transduction histidine kinase. (781 aa)
CFU_2474Histidine kinase. (469 aa)
phoRPhosphate regulon sensor protein phoR. (451 aa)
phoR2Phosphate regulon sensor protein. (434 aa)
CFU_2528Signal transduction histidine kinase; Member of a two-component regulatory system. (393 aa)
parETopoisomerase type IIAb; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (663 aa)
htpGChaperone protein; Molecular chaperone. Has ATPase activity. (665 aa)
CFU_2602Putative Signal transduction histidine kinase. (504 aa)
cusSPeriplasmic sensor signal transduction histidine kinase. (456 aa)
CFU_2646GGDEF family protein. (998 aa)
CFU_2931Two-component hybrid sensor and regulator. (1181 aa)
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (826 aa)
CFU_0154Signal transduction histidine kinase. (439 aa)
CFU_0184Sensor kinase protein; Member of a two-component regulatory system. (470 aa)
qseCSensory histidine kinase. (449 aa)
CFU_0479GGDEF family protein. (1022 aa)
atoSPutative two-component sensor kinase. (764 aa)
CFU_0763ATP-binding region, ATPase-like protein. (335 aa)
cheAChemotaxis protein. (1958 aa)
CFU_0976Signal transduction histidine kinase. (574 aa)
cheA2Chemotaxis protein. (664 aa)
CFU_1156Autolysin sensor kinase. (365 aa)
CFU_1188Periplasmic sensor signal transduction histidine kinase. (455 aa)
CFU_1193Signal transduction histidine kinase. (446 aa)
CFU_1197Periplasmic sensor signal transduction histidine kinase. (466 aa)
CFU_1243Heavy metal sensor histidine kinase; Member of a two-component regulatory system. (465 aa)
kdpDOsmosensitive K+ channel histidine kinase kdpD. (926 aa)
CFU_1535ATP-binding region, ATPase-like:Histidine kinase. (349 aa)
Your Current Organism:
Collimonas fungivorans
NCBI taxonomy Id: 1005048
Other names: C. fungivorans Ter331, Collimonas fungivorans Ter331, Collimonas fungivorans str. Ter331, Collimonas fungivorans strain Ter331, beta proteobacterium Ter331
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