STRINGSTRING
ntrB ntrB atoS atoS pilS pilS CFU_3678 CFU_3678 CFU_3677 CFU_3677 bvgS bvgS CFU_3423 CFU_3423 rocR rocR phoR2 phoR2 phoR phoR CFU_2018 CFU_2018 CFU_1945 CFU_1945 hrpX hrpX CFU_1810 CFU_1810 tdiS tdiS CFU_1174 CFU_1174
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ntrBNitrogen regulation protein NR(II). (427 aa)
atoSPutative two-component sensor kinase. (764 aa)
pilSTwo-component sensor PilS. (578 aa)
CFU_3678Putative PAS/PAC sensor protein. (299 aa)
CFU_3677Putative sensor/response regulator hybrid. (722 aa)
bvgSHybrid sensory histidine kinase in two-component regulatory system with EvgA. (1229 aa)
CFU_3423Putative regulator; putative membrane protein. (737 aa)
rocRArginine utilization regulatory protein r. (472 aa)
phoR2Phosphate regulon sensor protein. (434 aa)
phoRPhosphate regulon sensor protein phoR. (451 aa)
CFU_2018Signal-transducing histidine kinase, putative. (164 aa)
CFU_1945Putative signal transduction protein. (937 aa)
hrpXPAS/PAC sensor signal transduction histidine kinase. (984 aa)
CFU_1810Diguanylate cyclase/phosphodiesterase. (1021 aa)
tdiSPutative transcription regulator protein. (191 aa)
CFU_1174Conserved hypothetical protein; putative signal peptide. (946 aa)
Your Current Organism:
Collimonas fungivorans
NCBI taxonomy Id: 1005048
Other names: C. fungivorans Ter331, Collimonas fungivorans Ter331, Collimonas fungivorans str. Ter331, Collimonas fungivorans strain Ter331, beta proteobacterium Ter331
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