STRINGSTRING
crcA crcA CFU_0833 CFU_0833 acrA acrA tolC tolC lpxA lpxA CFU_1540 CFU_1540 tolC2 tolC2 CFU_2335 CFU_2335 ppiB ppiB arnB arnB arnC arnC arnA_DH arnA_DH pmrJ pmrJ CFU_2669 CFU_2669 mucD mucD CFU_3314 CFU_3314 CFU_3474 CFU_3474 amiC amiC dsbA dsbA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
crcALipid A acylation protein, palmitoyltransferase; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. (205 aa)
CFU_0833Inner membrane efflux transporter of RND family multidrug efflux pump. (1050 aa)
acrAMembrane fusion protein of RND family multidrug efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (468 aa)
tolCType I secretion outer membrane protein, precursor. (435 aa)
lpxAAcyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (270 aa)
CFU_1540Neutral protease precursor; Extracellular zinc metalloprotease. (604 aa)
tolC2Type I secretion outer membrane protein, TolC precursor. (453 aa)
CFU_2335Membrane protein, putative. (891 aa)
ppiBPeptidyl-prolyl cis-trans isomerase B (rotamase B)-like protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (196 aa)
arnBUDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (378 aa)
arnCPolymyxin resistance protein ArnC, glycosyl transferase. (323 aa)
arnA_DHPolymyxin resistance protein ArnA_DH, UDP-glucuronic acid decarboxylase. (351 aa)
pmrJPolymyxin resistance protein PmrJ, putative deacetylase. (315 aa)
CFU_2669Outer membrane efflux protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family. (499 aa)
mucDSerine protease precursor MucD/AlgY associated with sigma factor RpoE; Belongs to the peptidase S1C family. (502 aa)
CFU_3314Putative periplasmic serine protease; Belongs to the peptidase S1C family. (507 aa)
CFU_3474Type I secretion outer membrane protein, TolC family; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family. (473 aa)
amiCN-acetylmuramoyl-L-alanine amidase AmiC precursor. (449 aa)
dsbAPeriplasmic thiol:disulfide interchange protein DsbA. (237 aa)
Your Current Organism:
Collimonas fungivorans
NCBI taxonomy Id: 1005048
Other names: C. fungivorans Ter331, Collimonas fungivorans Ter331, Collimonas fungivorans str. Ter331, Collimonas fungivorans strain Ter331, beta proteobacterium Ter331
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