STRINGSTRING
DTL3_0419 DTL3_0419 dppD3 dppD3 dppC3 dppC3 dppB5 dppB5 DTL3_0423 DTL3_0423 dppA1 dppA1 dppB7 dppB7 dppC5 dppC5 dppD5 dppD5 dppF3 dppF3 dppF7 dppF7 dppD9 dppD9 dppC7 dppC7 dppB11 dppB11 dppA5 dppA5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DTL3_0419ABC-type oligopeptide transport system, ATPase component; High confidence in function and specificity; Belongs to the ABC transporter superfamily. (328 aa)
dppD3BC-type dipeptide/oligopeptide/nickel transport system, ATPase component; High confidence in function and specificity; Belongs to the ABC transporter superfamily. (321 aa)
dppC3ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; High confidence in function and specificity. (282 aa)
dppB5ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; High confidence in function and specificity. (338 aa)
DTL3_0423Putative ABC transporter substrate binding protein; High confidence in function and specificity. (634 aa)
dppA1ABC-type dipeptide transport system, periplasmic component; High confidence in function and specificity. (576 aa)
dppB7Peptide ABC transporter permease; High confidence in function and specificity. (336 aa)
dppC5ABC transporter permease; High confidence in function and specificity. (277 aa)
dppD5An ATP-binding component of the dipeptide ABC transporter; High confidence in function and specificity. (342 aa)
dppF3DppF is an ATP-binding component of the dipeptide ABC transporter; High confidence in function and specificity. (267 aa)
dppF7ABC-type oligopeptide transport system, ATPase component; High confidence in function and specificity; Belongs to the ABC transporter superfamily. (320 aa)
dppD9ABC-type dipeptide/oligopeptide/nickel transport system,ATPase component; High confidence in function and specificity; Belongs to the ABC transporter superfamily. (334 aa)
dppC7ABC-type dipeptide/oligopeptide/nickel transport systems, permease component; High confidence in function and specificity. (287 aa)
dppB11ABC-type dipeptide/oligopeptide/nickel transporter, permease components; High confidence in function and specificity. (335 aa)
dppA5ABC-type dipeptide transport protein, periplasmic component; The substrate binding domain of a cellulose-binding protein from Thermotoga maritima; High confidence in function and specificity. (627 aa)
Your Current Organism:
Defluviitoga tunisiensis
NCBI taxonomy Id: 1006576
Other names: D. tunisiensis, DSM 23805, Defluviitoga tunisiensis Ben Hania et al. 2012, JCM 17210, Thermotogaceae bacterium SulfLac1, strain SulfLac1
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