(4 nodes) Type 1 protein exporter network (Pusillimonas sp. T77)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PT7_0141	Peptide-transporting atpase. (614 aa)
	PT7_3371	Cyclic nucleotide-binding domain-containing protein. (936 aa)
	PT7_1250	ABC transporter. (592 aa)
	msbA	Lipid A exporting ATP-binding/permease ABC transporter; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (591 aa)

Your Current Organism:

Pusillimonas sp. T77

NCBI taxonomy Id: 1007105
Other names: P. sp. T7-7, Pusillimonas sp. T7-7

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PT7_0141	PT7_1250	PT7_0141	PT7_1250	Peptide-transporting atpase.	ABC transporter.	0.745
PT7_1250	PT7_0141	PT7_1250	PT7_0141	ABC transporter.	Peptide-transporting atpase.	0.745
PT7_1250	PT7_3371	PT7_1250	PT7_3371	ABC transporter.	Cyclic nucleotide-binding domain-containing protein.	0.777
PT7_1250	msbA	PT7_1250	PT7_0514	ABC transporter.	Lipid A exporting ATP-binding/permease ABC transporter; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.	0.746
PT7_3371	PT7_1250	PT7_3371	PT7_1250	Cyclic nucleotide-binding domain-containing protein.	ABC transporter.	0.777
msbA	PT7_1250	PT7_0514	PT7_1250	Lipid A exporting ATP-binding/permease ABC transporter; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.	ABC transporter.	0.746