STRINGSTRING
BN1708_011923 BN1708_011923 BN1708_009809 BN1708_009809 BN1708_011928 BN1708_011928 BN1708_004457 BN1708_004457 BN1708_012280 BN1708_012280 BN1708_012968 BN1708_012968 BN1708_011388 BN1708_011388
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BN1708_011923AB hydrolase-1 domain-containing protein. (353 aa)
BN1708_009809AB hydrolase-1 domain-containing protein. (343 aa)
BN1708_011928AB hydrolase-1 domain-containing protein. (353 aa)
BN1708_004457AB hydrolase-1 domain-containing protein. (343 aa)
BN1708_012280EHN domain-containing protein. (407 aa)
BN1708_012968EHN domain-containing protein. (705 aa)
BN1708_011388AB hydrolase-1 domain-containing protein. (316 aa)
Your Current Organism:
Verticillium longisporum
NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.
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