(38 nodes) Apoptosis network (Verticillium longisporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BN1708_001345	GED domain-containing protein. (178 aa)
	BN1708_001206	Protein kinase domain-containing protein. (627 aa)
	BN1708_001201	Protein kinase domain-containing protein. (649 aa)
	BN1708_016397	Peptidase_M48 domain-containing protein. (192 aa)
	UTR4	Enolase-phosphatase E1; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). (272 aa)
	BN1708_005717	Uncharacterized protein. (325 aa)
	BN1708_005699	Uncharacterized protein. (325 aa)
	BN1708_007521	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (106 aa)
	BN1708_018427	GED domain-containing protein. (413 aa)
	BN1708_015665	Uncharacterized protein. (97 aa)
	BN1708_015487	14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (101 aa)
	BN1708_004817	Uncharacterized protein. (1629 aa)
	BN1708_014864	SAP domain-containing protein. (656 aa)
	BN1708_004159	Uncharacterized protein. (1428 aa)
	BN1708_004143	H15 domain-containing protein. (222 aa)
	BN1708_010281	Uncharacterized protein. (2946 aa)
	BN1708_017524	14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (239 aa)
	BN1708_011848	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (387 aa)
	BN1708_012531	Uncharacterized protein. (307 aa)
	BN1708_000535	14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (282 aa)
	BN1708_000529	14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (456 aa)
	MDE1	Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). (310 aa)
	BN1708_009423	SAP domain-containing protein. (664 aa)
	BN1708_020748	Uncharacterized protein. (37 aa)
	BN1708_003576	Uncharacterized protein. (400 aa)
	BN1708_003446	Uncharacterized protein. (211 aa)
	BN1708_008638	Uncharacterized protein. (861 aa)
	MDE1-2	Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). (251 aa)
	BN1708_008573	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (919 aa)
	BN1708_008397	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (747 aa)
	BN1708_008317	H15 domain-containing protein. (286 aa)
	BN1708_007939	Uncharacterized protein. (3131 aa)
	BN1708_007585	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (1293 aa)
	BN1708_020251	Gelsolin-like domain-containing protein. (97 aa)
	BN1708_007336	Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (423 aa)
	BN1708_020179	Uncharacterized protein. (93 aa)
	BN1708_019974	GED domain-containing protein. (88 aa)
	BN1708_001306	Uncharacterized protein. (269 aa)

Your Current Organism:

Verticillium longisporum

NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BN1708_000529	BN1708_001306	A0A0G4LD01	A0A0G4MNL1	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	Uncharacterized protein.	0.439
BN1708_000529	BN1708_020179	A0A0G4LD01	A0A0G4MS02	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	Uncharacterized protein.	0.439
BN1708_000535	BN1708_001306	A0A0G4LCW1	A0A0G4MNL1	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	Uncharacterized protein.	0.439
BN1708_000535	BN1708_020179	A0A0G4LCW1	A0A0G4MS02	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	Uncharacterized protein.	0.439
BN1708_001306	BN1708_000529	A0A0G4MNL1	A0A0G4LD01	Uncharacterized protein.	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	0.439
BN1708_001306	BN1708_000535	A0A0G4MNL1	A0A0G4LCW1	Uncharacterized protein.	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	0.439
BN1708_001306	BN1708_015487	A0A0G4MNL1	A0A0G4M4L6	Uncharacterized protein.	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	0.439
BN1708_001306	BN1708_017524	A0A0G4MNL1	A0A0G4L4N0	Uncharacterized protein.	14_3_3 domain-containing protein; Belongs to the 14-3-3 family.	0.439
BN1708_001306	BN1708_020748	A0A0G4MNL1	A0A0G4KI61	Uncharacterized protein.	Uncharacterized protein.	0.439
BN1708_001345	BN1708_003446	A0A0G4MND2	A0A0G4KMG9	GED domain-containing protein.	Uncharacterized protein.	0.728
BN1708_001345	BN1708_004159	A0A0G4MND2	A0A0G4LY06	GED domain-containing protein.	Uncharacterized protein.	0.757
BN1708_001345	BN1708_007521	A0A0G4MND2	A0A0G4MCN4	GED domain-containing protein.	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.429
BN1708_001345	BN1708_008397	A0A0G4MND2	A0A0G4N3F7	GED domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.914
BN1708_001345	BN1708_008573	A0A0G4MND2	A0A0G4N5B1	GED domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.633
BN1708_001345	BN1708_016397	A0A0G4MND2	A0A0G4MLM6	GED domain-containing protein.	Peptidase_M48 domain-containing protein.	0.757
BN1708_001345	BN1708_018427	A0A0G4MND2	A0A0G4M769	GED domain-containing protein.	GED domain-containing protein.	0.417
BN1708_001345	BN1708_019974	A0A0G4MND2	A0A0G4MQ54	GED domain-containing protein.	GED domain-containing protein.	0.600
BN1708_003446	BN1708_001345	A0A0G4KMG9	A0A0G4MND2	Uncharacterized protein.	GED domain-containing protein.	0.728
BN1708_003446	BN1708_007585	A0A0G4KMG9	A0A0G4MUR8	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.728
BN1708_003446	BN1708_008397	A0A0G4KMG9	A0A0G4N3F7	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.728

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