STRINGSTRING
trmL trmL TASI_0079 TASI_0079 TASI_0080 TASI_0080 TASI_0571 TASI_0571 TASI_0572 TASI_0572 TASI_0696 TASI_0696 TASI_0697 TASI_0697 TASI_0698 TASI_0698 greB greB TASI_0979 TASI_0979 tatC tatC TASI_1447 TASI_1447 tatA tatA hisA hisA TASI_1451 TASI_1451 TASI_1452 TASI_1452 TASI_1453 TASI_1453 TASI_1454 TASI_1454 TASI_1455 TASI_1455 TASI_1456 TASI_1456 TASI_1457 TASI_1457 TASI_1458 TASI_1458 TASI_1459 TASI_1459
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
trmLtRNA (cytosine34-2'-O-)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide. (156 aa)
TASI_0079Competence protein F-like protein, phosphoribosyltransferase domain protein; Protein YhgH required for utilization of DNA as sole source of carbon and energy. (187 aa)
TASI_0080Biotin synthesis protein bioC. (305 aa)
TASI_0571DNA repair protein RadC; Belongs to the UPF0758 family. (227 aa)
TASI_0572FKBP-type peptidyl-prolyl cis-trans isomerase slpA. (155 aa)
TASI_0696Putative deoxyribonuclease YjjV. (267 aa)
TASI_0697Putative DNA internalization-related competence protein; ComEC/Rec2 (partial). (810 aa)
TASI_0698COG0613 metal-dependent phosphoesterases(PHP family). (276 aa)
greBTranscription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length. (188 aa)
TASI_0979Putative chelatase. (492 aa)
tatCTwin-arginine translocation protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (250 aa)
TASI_1447Twin-arginine translocation protein TatB. (118 aa)
tatATwin-arginine translocation protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (92 aa)
hisAPhosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase. (251 aa)
TASI_1451YrbA protein; Belongs to the BolA/IbaG family. (82 aa)
TASI_1452ABC-type multidrug transport system, permease component. (262 aa)
TASI_1453ABC-type multidrug transport system, ATPase component. (267 aa)
TASI_1454Putative ABC transporter; Auxiliary component YrbC. (197 aa)
TASI_1455Putative lipoprotein. (275 aa)
TASI_1456Putative ABC transporter; Periplasmic component YrbD. (157 aa)
TASI_1457Putative ABC transporter; Permease component YrbE. (258 aa)
TASI_1458Putative ABC transporter, ATP-binding protein. (260 aa)
TASI_1459Rossmann fold nucleotide-binding protein Smf; Possibly involved in DNA uptake. (375 aa)
Your Current Organism:
Taylorella asinigenitalis
NCBI taxonomy Id: 1008459
Other names: T. asinigenitalis MCE3, Taylorella asinigenitalis MCE3, Taylorella asinigenitalis str. MCE3, Taylorella asinigenitalis strain MCE3
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