STRINGSTRING
TASI_0042 TASI_0042 TASI_0082 TASI_0082 atpD atpD TASI_0160 TASI_0160 ftsE ftsE TASI_0186 TASI_0186 TASI_0222 TASI_0222 TASI_0223 TASI_0223 TASI_0240 TASI_0240 ffh ffh ftsY ftsY TASI_0405 TASI_0405 TASI_0406 TASI_0406 TASI_0421 TASI_0421 TASI_0518 TASI_0518 TASI_0519 TASI_0519 TASI_0597 TASI_0597 rho rho lolD lolD TASI_0731 TASI_0731 der der TASI_0812 TASI_0812 TASI_0813 TASI_0813 recA recA TASI_0909 TASI_0909 TASI_0910 TASI_0910 TASI_0929 TASI_0929 msbA msbA TASI_0958 TASI_0958 potA potA radA radA TASI_1012 TASI_1012 TASI_1097 TASI_1097 TASI_1105 TASI_1105 dnaA dnaA TASI_0005 TASI_0005 TASI_0008 TASI_0008 TASI_1537 TASI_1537 metN metN TASI_1468 TASI_1468 TASI_1458 TASI_1458 TASI_1453 TASI_1453 TASI_1423 TASI_1423 TASI_1350 TASI_1350 TASI_1316 TASI_1316 TASI_1312 TASI_1312 ruvB ruvB dnaX dnaX ftsH ftsH pstB pstB TASI_1175 TASI_1175 TASI_1157 TASI_1157 clpX clpX lon lon TASI_1113 TASI_1113
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TASI_0042Histidine ABC transporter, ATP-binding protein HisP; TC 3.A.1.3.1. (255 aa)
TASI_0082ClpB protein; Belongs to the ClpA/ClpB family. (948 aa)
atpDATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (467 aa)
TASI_0160ABC transporter ATP-binding protein. (297 aa)
ftsECell division transporter, ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (222 aa)
TASI_0186ABC-type polar amino acid transport system, ATPase component. (246 aa)
TASI_0222Oligopeptide transport ATP-binding protein OppD; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily. (336 aa)
TASI_0223Oligopeptide transport ATP-binding protein OppF; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily. (327 aa)
TASI_0240Lipopolysaccharide ABC transporter, ATP-binding protein LptB. (252 aa)
ffhSignal recognition particle, subunit Ffh SRP54; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individu [...] (471 aa)
ftsYSignal recognition particle receptor protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. (445 aa)
TASI_0405Dipeptide transport ATP-binding protein DppD; TC 3.A.1.5.2; Belongs to the ABC transporter superfamily. (355 aa)
TASI_0406Dipeptide transport ATP-binding protein DppF; TC 3.A.1.5.2; Belongs to the ABC transporter superfamily. (331 aa)
TASI_0421Phage protein; Possible AAA ATPase. (295 aa)
TASI_0518ABC-type branched-chain amino acid transport systems, ATPase component; Belongs to the binding-protein-dependent transport system permease family. (597 aa)
TASI_0519Branched-chain amino acid transport ATP-binding protein LivF; TC 3.A.1.4.1. (246 aa)
TASI_0597ABC transporter; COG0488: ATPase components of ABC transporters with duplicated ATPase domains. (597 aa)
rhoTranscription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (418 aa)
lolDLipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (228 aa)
TASI_0731ATP-binding ABC transporter protein. (534 aa)
derGTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (459 aa)
TASI_0812Methionine ABC transporter ATP-binding protein. (261 aa)
TASI_0813Glutathione-regulated potassium-efflux system ATP-binding protein. (637 aa)
recARecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (354 aa)
TASI_0909Branched-chain amino acid transport ATP-binding protein LivF; TC 3.A.1.4.1. (233 aa)
TASI_0910Branched-chain amino acid transport ATP-binding protein LivG; TC 3.A.1.4.1. (255 aa)
TASI_0929ABC-type multidrug transport system, permease component. (910 aa)
msbALipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (595 aa)
TASI_0958Macromolecule metabolism protein; Macromolecule synthesis, modification; dna - replication, repair, restr./modif. (1281 aa)
potAPutrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (372 aa)
radADNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (423 aa)
TASI_1012ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (327 aa)
TASI_1097ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. (774 aa)
TASI_1105Ferric iron ABC transporter, ATP-binding protein. (256 aa)
dnaAChromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (502 aa)
TASI_0005Oligopeptide transport ATP-binding protein OppF; TC 3.A.1.5.1. (273 aa)
TASI_0008Oligopeptide transport ATP-binding protein OppD; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily. (321 aa)
TASI_1537ABC-type multidrug transport system; COG1132:,ATPase and permease components. (611 aa)
metNMethionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (368 aa)
TASI_1468Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (956 aa)
TASI_1458Putative ABC transporter, ATP-binding protein. (260 aa)
TASI_1453ABC-type multidrug transport system, ATPase component. (267 aa)
TASI_1423Hypothetical protein. (222 aa)
TASI_1350Dipeptide transport ATP-binding protein DppD; TC 3.A.1.5.2; Belongs to the ABC transporter superfamily. (625 aa)
TASI_1316Excinuclease ABC subunit A, dimeric form; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (1784 aa)
TASI_1312Putative ABC transport ATP-binding subunit. (557 aa)
ruvBHolliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (357 aa)
dnaXDNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (387 aa)
ftsHCell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (633 aa)
pstBPhosphate transport ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (261 aa)
TASI_1175ATPase, AAA family. (430 aa)
TASI_1157ABC transporter, ATP-binding protein. (231 aa)
clpXATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (408 aa)
lonATP-dependent protease La Type I; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (812 aa)
TASI_1113Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (476 aa)
Your Current Organism:
Taylorella asinigenitalis
NCBI taxonomy Id: 1008459
Other names: T. asinigenitalis MCE3, Taylorella asinigenitalis MCE3, Taylorella asinigenitalis str. MCE3, Taylorella asinigenitalis strain MCE3
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