STRINGSTRING
Apba1 Apba1 Gja1 Gja1 Trpv1 Trpv1 Nf1 Nf1 Ntrk2 Ntrk2 Bdnf Bdnf P2rx7 P2rx7 Pak1 Pak1 Gipc1 Gipc1 Myo6 Myo6 Grm2 Grm2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Apba1Amyloid beta A4 precursor protein-binding family A member 1. (844 aa)
Gja1Gap junction alpha-1 protein. (382 aa)
Trpv1Transient receptor potential cation channel, subfamily V, member 1. (779 aa)
Nf1Neurofibromin. (2841 aa)
Ntrk2BDNF/NT-3 growth factors receptor isoform X1. (821 aa)
BdnfLOW QUALITY PROTEIN: brain-derived neurotrophic factor. (289 aa)
P2rx7P2X purinoceptor 7 isoform X1. (595 aa)
Pak1Serine/threonine-protein kinase PAK 1. (544 aa)
Gipc1PDZ domain-containing protein GIPC1. (333 aa)
Myo6Unconventional myosin-VI. (1294 aa)
Grm2Metabotropic glutamate receptor 2 isoform X1. (872 aa)
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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