(33 nodes) Negative regulation of smooth muscle cell migration network (Mus caroli)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Tpm1	Tropomyosin alpha-1 chain isoform X1. (326 aa)
	Slit2	Slit homolog 2 protein isoform X1. (1542 aa)
	Park7	Protein DJ-1. (189 aa)
	Sema6d	Semaphorin-6D isoform X1. (1069 aa)
	Nfe2l2	Nuclear factor erythroid 2-related factor 2. (597 aa)
	Egfl7	Epidermal growth factor-like protein 7. (278 aa)
	Prkg1	CGMP-dependent protein kinase 1 isoform X1. (686 aa)
	Coro1b	Coronin-1B/1C/6. (484 aa)
	MGP_CAROLIEiJ_P0047414	annotation not available (301 aa)
	MGP_CAROLIEiJ_P0047413	annotation not available (249 aa)
	Aif1	Allograft inflammatory factor 1 isoform X1. (147 aa)
	Ppard	Peroxisome proliferator-activated receptor delta. (440 aa)
	Adipoq	Adiponectin. (247 aa)
	Pdgfb	Platelet-derived growth factor subunit B. (242 aa)
	Trib1	Tribbles homolog 1/2. (372 aa)
	Apex1	DNA-(apurinic or apyrimidinic site) lyase. (317 aa)
	Bmpr1a	Bone morphogenetic protein receptor type-1A. (532 aa)
	Mef2c	Myocyte-specific enhancer factor 2C isoform X1. (483 aa)
	Gna13	Guanine nucleotide-binding protein subunit alpha-13. (377 aa)
	Nf1	Neurofibromin. (2841 aa)
	Myocd	Myocardin isoform X1. (983 aa)
	Igfbp3	Insulin-like growth factor-binding protein 3. (292 aa)
	Lrp1	Low-density lipoprotein receptor-related protein 1 (alpha-2-macroglobulin receptor). (4545 aa)
	Igfbp5	Insulin-like growth factor-binding protein 5. (271 aa)
	Gna12	Guanine nucleotide-binding protein subunit alpha-12. (379 aa)
	Cav1	Caveolin 1. (178 aa)
	Pparg	Peroxisome proliferator-activated receptor gamma isoform X1. (505 aa)
	Abhd2	Abhydrolase domain-containing protein 2. (425 aa)
	Ilk	Integrin-linked protein kinase. (452 aa)
	Drd4	D(4) dopamine receptor. (386 aa)
	Ndrg4	NDRG family member 4. (444 aa)
	S1pr2	Sphingosine 1-phosphate receptor 2. (352 aa)
	Ppargc1a	Peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1. (796 aa)

Your Current Organism:

Mus caroli

NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Adipoq	Igfbp3	MGP_CAROLIEiJ_P0041092	MGP_CAROLIEiJ_P0025653	Adiponectin.	Insulin-like growth factor-binding protein 3.	0.497
Adipoq	Lrp1	MGP_CAROLIEiJ_P0041092	MGP_CAROLIEiJ_P0025043	Adiponectin.	Low-density lipoprotein receptor-related protein 1 (alpha-2-macroglobulin receptor).	0.426
Adipoq	Nfe2l2	MGP_CAROLIEiJ_P0041092	MGP_CAROLIEiJ_P0052395	Adiponectin.	Nuclear factor erythroid 2-related factor 2.	0.400
Adipoq	Ppard	MGP_CAROLIEiJ_P0041092	MGP_CAROLIEiJ_P0043608	Adiponectin.	Peroxisome proliferator-activated receptor delta.	0.563
Adipoq	Pparg	MGP_CAROLIEiJ_P0041092	MGP_CAROLIEiJ_P0075565	Adiponectin.	Peroxisome proliferator-activated receptor gamma isoform X1.	0.771
Adipoq	Ppargc1a	MGP_CAROLIEiJ_P0041092	MGP_CAROLIEiJ_P0068146	Adiponectin.	Peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1.	0.698
Cav1	Pparg	MGP_CAROLIEiJ_P0072679	MGP_CAROLIEiJ_P0075565	Caveolin 1.	Peroxisome proliferator-activated receptor gamma isoform X1.	0.500
Gna12	Gna13	MGP_CAROLIEiJ_P0071892	MGP_CAROLIEiJ_P0030687	Guanine nucleotide-binding protein subunit alpha-12.	Guanine nucleotide-binding protein subunit alpha-13.	0.987
Gna12	S1pr2	MGP_CAROLIEiJ_P0071892	MGP_CAROLIEiJ_P0086916	Guanine nucleotide-binding protein subunit alpha-12.	Sphingosine 1-phosphate receptor 2.	0.986
Gna13	Gna12	MGP_CAROLIEiJ_P0030687	MGP_CAROLIEiJ_P0071892	Guanine nucleotide-binding protein subunit alpha-13.	Guanine nucleotide-binding protein subunit alpha-12.	0.987
Gna13	S1pr2	MGP_CAROLIEiJ_P0030687	MGP_CAROLIEiJ_P0086916	Guanine nucleotide-binding protein subunit alpha-13.	Sphingosine 1-phosphate receptor 2.	0.991
Igfbp3	Adipoq	MGP_CAROLIEiJ_P0025653	MGP_CAROLIEiJ_P0041092	Insulin-like growth factor-binding protein 3.	Adiponectin.	0.497
Igfbp3	Igfbp5	MGP_CAROLIEiJ_P0025653	MGP_CAROLIEiJ_P0018219	Insulin-like growth factor-binding protein 3.	Insulin-like growth factor-binding protein 5.	0.928
Igfbp3	Pdgfb	MGP_CAROLIEiJ_P0025653	MGP_CAROLIEiJ_P0039025	Insulin-like growth factor-binding protein 3.	Platelet-derived growth factor subunit B.	0.782
Igfbp3	Pparg	MGP_CAROLIEiJ_P0025653	MGP_CAROLIEiJ_P0075565	Insulin-like growth factor-binding protein 3.	Peroxisome proliferator-activated receptor gamma isoform X1.	0.692
Igfbp5	Igfbp3	MGP_CAROLIEiJ_P0018219	MGP_CAROLIEiJ_P0025653	Insulin-like growth factor-binding protein 5.	Insulin-like growth factor-binding protein 3.	0.928
Igfbp5	Pdgfb	MGP_CAROLIEiJ_P0018219	MGP_CAROLIEiJ_P0039025	Insulin-like growth factor-binding protein 5.	Platelet-derived growth factor subunit B.	0.770
Lrp1	Adipoq	MGP_CAROLIEiJ_P0025043	MGP_CAROLIEiJ_P0041092	Low-density lipoprotein receptor-related protein 1 (alpha-2-macroglobulin receptor).	Adiponectin.	0.426
MGP_CAROLIEiJ_P0047413	Nfe2l2	MGP_CAROLIEiJ_P0047413	MGP_CAROLIEiJ_P0052395	annotation not available	Nuclear factor erythroid 2-related factor 2.	0.418
MGP_CAROLIEiJ_P0047414	Nfe2l2	MGP_CAROLIEiJ_P0047414	MGP_CAROLIEiJ_P0052395	annotation not available	Nuclear factor erythroid 2-related factor 2.	0.418