STRINGSTRING
Traf6 Traf6 LOC110312394 LOC110312394 H2-DMa H2-DMa H2-Oa H2-Oa Fcer1g Fcer1g Fcgr2b Fcgr2b Ctse Ctse Pikfyve Pikfyve Ifi30 Ifi30 Ctss Ctss B2m B2m Unc93b1 Unc93b1 Cd74 Cd74 H2-Eb2 H2-Eb2 H2-Eb1 H2-Eb1 H2-Aa H2-Aa H2-Ab1 H2-Ab1 H2-Ob H2-Ob MGP_CAROLIEiJ_P0044164 MGP_CAROLIEiJ_P0044164
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Traf6TNF receptor-associated factor 6. (528 aa)
LOC110312394Class II histocompatibility antigen, M beta 1 chain isoform X1. (246 aa)
H2-DMaClass II histocompatibility antigen, M alpha chain. (261 aa)
H2-OaHLA class II histocompatibility antigen, DO alpha chain. (250 aa)
Fcer1gHigh affinity immunoglobulin epsilon receptor subunit gamma. (92 aa)
Fcgr2bFc receptor, IgG, low affinity IIb. (340 aa)
CtseCathepsin E. (397 aa)
Pikfyve1-phosphatidylinositol 3-phosphate 5-kinase. (2097 aa)
Ifi30Gamma-interferon-inducible lysosomal thiol reductase. (248 aa)
CtssCathepsin S. (342 aa)
B2mBeta-2-microglobulin. (119 aa)
Unc93b1Protein unc-93 homolog B1 isoform X1. (619 aa)
Cd74HLA class II histocompatibility antigen gamma chain isoform X1. (331 aa)
H2-Eb2H-2 class II histocompatibility antigen, I-E beta chain-like isoform X1. (284 aa)
H2-Eb1H-2 class II histocompatibility antigen, E-D beta chain isoform X1. (264 aa)
H2-AaH-2 class II histocompatibility antigen, A-U alpha chain. (256 aa)
H2-Ab1H-2 class II histocompatibility antigen, A beta chain. (264 aa)
H2-ObHLA class II histocompatibility antigen, DO beta chain isoform X1. (271 aa)
MGP_CAROLIEiJ_P0044164annotation not available (130 aa)
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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