STRINGSTRING
Ppard Ppard Arg1 Arg1 Rara Rara Slc34a1 Slc34a1 Map1b Map1b Gata4 Gata4 Vegfa Vegfa Cyp26a1 Cyp26a1 Cat Cat Lrat Lrat Tshb Tshb Pitx2 Pitx2 MGP_CAROLIEiJ_P0067115 MGP_CAROLIEiJ_P0067115 Epo Epo Cyp26b1 Cyp26b1 Pparg Pparg Muc5ac Muc5ac Cyp1a1 Cyp1a1 Aldh1a2 Aldh1a2 Rbp1 Rbp1 Serpina7 Serpina7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PpardPeroxisome proliferator-activated receptor delta. (440 aa)
Arg1Arginase-1. (323 aa)
RaraRetinoic acid receptor alpha isoform X1. (462 aa)
Slc34a1Solute carrier family 34 (sodium-dependent phosphate cotransporter). (637 aa)
Map1bMicrotubule-associated protein 1B. (2463 aa)
Gata4Transcription factor GATA-4. (442 aa)
VegfaVascular endothelial growth factor A isoform X1. (214 aa)
Cyp26a1Cytochrome P450 family 26 subfamily A. (497 aa)
CatCatalase. (527 aa)
LratPhosphatidylcholine-retinol O-acyltransferase. (231 aa)
TshbThyrotropin subunit beta isoform X1. (138 aa)
Pitx2Paired-like homeodomain transcription factor 2. (324 aa)
MGP_CAROLIEiJ_P0067115annotation not available (175 aa)
EpoErythropoietin isoform X1. (192 aa)
Cyp26b1Cytochrome P450 family 26 subfamily B. (512 aa)
PpargPeroxisome proliferator-activated receptor gamma isoform X1. (505 aa)
Muc5acMucin 5, subtypes A and C, tracheobronchial/gastric. (2750 aa)
Cyp1a1Cytochrome P450 family 1 subfamily A polypeptide 1. (524 aa)
Aldh1a2Retinal dehydrogenase 2. (518 aa)
Rbp1LOW QUALITY PROTEIN: retinol-binding protein 1. (135 aa)
Serpina7Thyroxine-binding globulin isoform X1. (426 aa)
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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