STRINGSTRING
Zfyve27 Zfyve27 Bex1 Bex1 Bcar1 Bcar1 Coro1a Coro1a Ntrk3 Ntrk3 Sos1 Sos1 Ddit4 Ddit4 Hap1 Hap1 Kidins220 Kidins220 Ntrk2 Ntrk2 Ntrk1 Ntrk1 Ngf Ngf Rap1a Rap1a Sort1 Sort1 Magi2 Magi2 Ptpn11 Ptpn11 Lmtk2 Lmtk2 Raf1 Raf1 Ntf3 Ntf3 Nkpd1 Nkpd1 Akt1s1 Akt1s1 Ntf5 Ntf5 Ndn Ndn Rapgef2 Rapgef2 Src Src Bdnf Bdnf Rapgef1 Rapgef1 Gfra1 Gfra1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Zfyve27Protrudin. (415 aa)
Bex1Protein BEX1. (128 aa)
Bcar1Breast cancer anti-estrogen resistance protein 1 isoform X1. (874 aa)
Coro1aCoronin-1A. (461 aa)
Ntrk3Neurotrophic tyrosine kinase, receptor type 3. (864 aa)
Sos1Son of sevenless homolog 1. (1319 aa)
Ddit4DNA damage-inducible transcript 4 protein. (229 aa)
Hap1Huntingtin-associated protein 1 isoform X1. (628 aa)
Kidins220Kinase D-interacting substrate of 220 kDa isoform X1. (1793 aa)
Ntrk2BDNF/NT-3 growth factors receptor isoform X1. (821 aa)
Ntrk1High affinity nerve growth factor receptor isoform X1. (799 aa)
NgfNerve growth factor, beta. (307 aa)
Rap1aRas-related protein Rap-1A. (184 aa)
Sort1Sortilin isoform X1. (858 aa)
Magi2Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2 isoform X1. (1414 aa)
Ptpn11Tyrosine-protein phosphatase non-receptor type 11 isoform X1. (597 aa)
Lmtk2Serine/threonine-protein kinase LMTK2 isoform X1. (1483 aa)
Raf1RAF proto-oncogene serine/threonine-protein kinase. (648 aa)
Ntf3Neurotrophin-3 isoform X1. (271 aa)
Nkpd1NTPase KAP family P-loop domain-containing protein 1. (825 aa)
Akt1s1AKT1 substrate 1. (328 aa)
Ntf5Neurotrophin 4. (209 aa)
NdnNecdin. (325 aa)
Rapgef2Rap guanine nucleotide exchange factor 2. (1657 aa)
SrcProto-oncogene tyrosine-protein kinase Src. (541 aa)
BdnfLOW QUALITY PROTEIN: brain-derived neurotrophic factor. (289 aa)
Rapgef1Rap guanine nucleotide exchange factor 1 isoform X1. (1223 aa)
Gfra1GDNF family receptor alpha-1 isoform X1. (468 aa)
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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