STRINGSTRING
Ntf5 Ntf5 Nkpd1 Nkpd1 Magi2 Magi2 Coro1a Coro1a Ntf3 Ntf3 Kidins220 Kidins220 Rapgef1 Rapgef1 Bdnf Bdnf Rapgef2 Rapgef2 Ntrk1 Ntrk1 Ngf Ngf Rap1a Rap1a Sort1 Sort1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Ntf5Neurotrophin 4. (209 aa)
Nkpd1NTPase KAP family P-loop domain-containing protein 1. (825 aa)
Magi2Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2 isoform X1. (1414 aa)
Coro1aCoronin-1A. (461 aa)
Ntf3Neurotrophin-3 isoform X1. (271 aa)
Kidins220Kinase D-interacting substrate of 220 kDa isoform X1. (1793 aa)
Rapgef1Rap guanine nucleotide exchange factor 1 isoform X1. (1223 aa)
BdnfLOW QUALITY PROTEIN: brain-derived neurotrophic factor. (289 aa)
Rapgef2Rap guanine nucleotide exchange factor 2. (1657 aa)
Ntrk1High affinity nerve growth factor receptor isoform X1. (799 aa)
NgfNerve growth factor, beta. (307 aa)
Rap1aRas-related protein Rap-1A. (184 aa)
Sort1Sortilin isoform X1. (858 aa)
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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