STRINGSTRING
Ajuba Ajuba Vcl Vcl Numb Numb Jup Jup Cdh1 Cdh1 Pkp3 Pkp3 Numbl Numbl Ptprt Ptprt Cdh2 Cdh2 Ctnnb1 Ctnnb1 Pkp2 Pkp2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AjubaLIM domain-containing protein ajuba. (547 aa)
VclVinculin. (1066 aa)
NumbProtein numb homolog isoform X1. (652 aa)
JupJunction plakoglobin. (745 aa)
Cdh1Cadherin 1, type 1, E-cadherin. (884 aa)
Pkp3Plakophilin 3. (822 aa)
NumblNumb-like protein isoform X1. (604 aa)
PtprtReceptor-type tyrosine-protein phosphatase T isoform X1. (1455 aa)
Cdh2Cadherin 2, type 1, N-cadherin. (906 aa)
Ctnnb1Catenin beta 1. (781 aa)
Pkp2Plakophilin 2. (795 aa)
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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