(100 nodes) Positive regulation of axonogenesis network (Mus caroli)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Golga2	Golgin subfamily A member 2 isoform X1. (1026 aa)
	Dbn1	Drebrin 1. (707 aa)
	Sema4d	Semaphorin-4D isoform X1. (859 aa)
	Eif2b2	Translation initiation factor eIF-2B subunit beta. (351 aa)
	Nin	Ninein isoform X1. (2113 aa)
	Mapt	Microtubule associated protein tau. (749 aa)
	Wnt3	Wingless-type MMTV integration site family, member 3. (355 aa)
	Rnd2	Rho-related GTP-binding protein RhoN. (227 aa)
	MGP_CAROLIEiJ_P0029410	annotation not available (239 aa)
	Pafah1b1	Platelet-activating factor acetylhydrolase IB subunit alpha. (410 aa)
	Ndel1	Nuclear distribution protein nudE-like 1 isoform X1. (345 aa)
	Ntn1	Netrin 1. (604 aa)
	Trpv2	Transient receptor potential cation channel subfamily V member 2. (756 aa)
	Wnt3a	Wingless-type MMTV integration site family, member 3. (352 aa)
	Bcl11a	B-cell lymphoma/leukemia 11A isoform X1. (835 aa)
	Dbnl	Drebrin-like protein isoform X1. (436 aa)
	Lrp1	Low-density lipoprotein receptor-related protein 1 (alpha-2-macroglobulin receptor). (4545 aa)
	Plxnc1	Plexin-C1. (1574 aa)
	Map2k2	Dual specificity mitogen-activated protein kinase kinase 2 isoform X1. (401 aa)
	Stk11	Serine/threonine-protein kinase STK11 isoform X1. (441 aa)
	Plxna2	Plexin-A2. (1894 aa)
	Stk25	Serine/threonine-protein kinase 24/25/MST4. (426 aa)
	Fn1	Fibronectin 1. (2477 aa)
	Bmpr2	Bone morphogenetic protein receptor type-2 isoform X1. (1038 aa)
	Ntrk2	BDNF/NT-3 growth factors receptor isoform X1. (821 aa)
	Cdkl5	Cyclin-dependent kinase-like 5. (960 aa)
	Trpc5	Transient receptor potential cation channel subfamily C member 5. (975 aa)
	Dcx	Neuronal migration protein doublecortin isoform X1. (366 aa)
	Plxna3	Plexin-A3 isoform X1. (1872 aa)
	Gdi1	Rab GDP dissociation inhibitor alpha. (447 aa)
	L1cam	Neural cell adhesion molecule L1 isoform X1. (1259 aa)
	Plxnb3	Plexin-B3. (1902 aa)
	Trak1	Trafficking kinesin-binding protein 1 isoform X1. (939 aa)
	Golga4	Golgin subfamily A member 4 isoform X1. (2177 aa)
	Plxnb1	Plexin-B1. (2119 aa)
	Amigo3	Amphoterin-induced protein 3. (508 aa)
	Twf2	Twinfilin-2. (349 aa)
	Snap91	Clathrin coat assembly protein AP180. (830 aa)
	Map2k1	Dual specificity mitogen-activated protein kinase kinase 1 isoform X1. (393 aa)
	Rpl4	Large subunit ribosomal protein L4e. (420 aa)
	Islr2	Immunoglobulin superfamily containing leucine-rich repeat protein 2 isoform X1. (789 aa)
	Islr	Immunoglobulin superfamily containing leucine-rich repeat protein. (428 aa)
	Sema7a	Semaphorin-7A. (664 aa)
	Layn	Layilin isoform X1. (381 aa)
	Dixdc1	Dixin isoform X1. (710 aa)
	Nrp1	Neuropilin-1 isoform X1. (923 aa)
	Disc1	Disrupted in schizophrenia 1 protein isoform X1. (851 aa)
	Ist1	Vacuolar protein sorting-associated protein IST1. (362 aa)
	Zeb2	Zinc finger E-box-binding homeobox 2. (1259 aa)
	Bdnf	LOW QUALITY PROTEIN: brain-derived neurotrophic factor. (289 aa)
	Adnp	Activity-dependent neuroprotector homeobox protein isoform X1. (1105 aa)
	Cdh4	Cadherin 4, type 1, R-cadherin. (913 aa)
	Skil	Ski-like protein isoform X1. (677 aa)
	Shox2	Short stature homeobox protein 2 isoform X1. (331 aa)
	Crabp2	Cellular retinoic acid-binding protein 2 isoform X1. (138 aa)
	Ngf	Nerve growth factor, beta. (307 aa)
	Amigo1	Amphoterin-induced protein 1 isoform X1. (492 aa)
	Lpar3	Lysophosphatidic acid receptor 3. (354 aa)
	Macf1	Microtubule-actin cross-linking factor 1. (7360 aa)
	Rufy3	Protein RUFY3. (499 aa)
	Limk1	LIM domain kinase 1 isoform X1. (647 aa)
	Ache	Acetylcholinesterase. (614 aa)
	Ocm	Putative oncomodulin-2. (109 aa)
	Plxna4	Plexin-A4 isoform X1. (1893 aa)
	Braf	B-Raf proto-oncogene serine/threonine-protein kinase. (804 aa)
	Plxna1	Plexin-A1. (1912 aa)
	Plxnd1	Plexin-D1. (1925 aa)
	Cxcl12	Stromal cell-derived factor 1. (119 aa)
	Apoe	Apolipoprotein E. (312 aa)
	Megf8	Multipile epidermal growth factor-like domains protein 8. (2789 aa)
	Cyfip1	Cytoplasmic FMR1-interacting protein 1 isoform X1. (1253 aa)
	Ntrk3	Neurotrophic tyrosine kinase, receptor type 3. (864 aa)
	Picalm	Phosphatidylinositol-binding clathrin assembly protein isoform X1. (660 aa)
	Pak1	Serine/threonine-protein kinase PAK 1. (544 aa)
	Map6	Microtubule-associated protein 6 isoform X1. (860 aa)
	Ilk	Integrin-linked protein kinase. (452 aa)
	Pou4f2	POU domain, class 4, transcription factor 2 isoform X1. (411 aa)
	Slitrk1	SLIT and NTRK-like protein 1. (696 aa)
	Map1b	Microtubule-associated protein 1B. (2463 aa)
	Nefl	Neurofilament light polypeptide. (543 aa)
	Sema5a	Semaphorin-5A. (1074 aa)
	Map3k13	Mitogen-activated protein kinase kinase kinase 13. (960 aa)
	Gsk3b	Glycogen synthase kinase 3 beta. (433 aa)
	Robo1	Roundabout, axon guidance receptor 1. (1612 aa)
	Robo2	Roundabout, axon guidance receptor 2. (1508 aa)
	Chodl	Chondrolectin isoform X1. (291 aa)
	Tiam1	T-lymphoma invasion and metastasis-inducing protein 1. (1591 aa)
	Dscam	Down syndrome cell adhesion molecule. (2013 aa)
	Tiam2	T-lymphoma invasion and metastasis-inducing protein 2 isoform X1. (1709 aa)
	Tnfrsf12a	Tumor necrosis factor receptor superfamily member 12A. (129 aa)
	Metrn	Meteorin. (291 aa)
	Vegfa	Vascular endothelial growth factor A isoform X1. (214 aa)
	Srf	Serum response factor. (504 aa)
	Efna5	Ephrin-A5 isoform X1. (228 aa)
	Myo5b	Unconventional myosin-Vb isoform X1. (1844 aa)
	Cntf	Ciliary neurotrophic factor. (198 aa)
	Fxn	Frataxin, mitochondrial. (208 aa)
	Zfyve27	Protrudin. (415 aa)
	Shtn1	Shootin-1 isoform X1. (631 aa)
	Anapc2	Anaphase-promoting complex subunit 2. (831 aa)

Your Current Organism:

Mus caroli

NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ache	Apoe	MGP_CAROLIEiJ_P0071461	MGP_CAROLIEiJ_P0077810	Acetylcholinesterase.	Apolipoprotein E.	0.417
Ache	Bdnf	MGP_CAROLIEiJ_P0071461	MGP_CAROLIEiJ_P0053564	Acetylcholinesterase.	LOW QUALITY PROTEIN: brain-derived neurotrophic factor.	0.595
Ache	Gsk3b	MGP_CAROLIEiJ_P0071461	MGP_CAROLIEiJ_P0041562	Acetylcholinesterase.	Glycogen synthase kinase 3 beta.	0.503
Ache	Mapt	MGP_CAROLIEiJ_P0071461	MGP_CAROLIEiJ_P0030436	Acetylcholinesterase.	Microtubule associated protein tau.	0.457
Ache	Ngf	MGP_CAROLIEiJ_P0071461	MGP_CAROLIEiJ_P0059545	Acetylcholinesterase.	Nerve growth factor, beta.	0.578
Apoe	Ache	MGP_CAROLIEiJ_P0077810	MGP_CAROLIEiJ_P0071461	Apolipoprotein E.	Acetylcholinesterase.	0.417
Apoe	Bdnf	MGP_CAROLIEiJ_P0077810	MGP_CAROLIEiJ_P0053564	Apolipoprotein E.	LOW QUALITY PROTEIN: brain-derived neurotrophic factor.	0.666
Apoe	Gsk3b	MGP_CAROLIEiJ_P0077810	MGP_CAROLIEiJ_P0041562	Apolipoprotein E.	Glycogen synthase kinase 3 beta.	0.578
Apoe	Lrp1	MGP_CAROLIEiJ_P0077810	MGP_CAROLIEiJ_P0025043	Apolipoprotein E.	Low-density lipoprotein receptor-related protein 1 (alpha-2-macroglobulin receptor).	0.983
Apoe	Mapt	MGP_CAROLIEiJ_P0077810	MGP_CAROLIEiJ_P0030436	Apolipoprotein E.	Microtubule associated protein tau.	0.717
Apoe	Ngf	MGP_CAROLIEiJ_P0077810	MGP_CAROLIEiJ_P0059545	Apolipoprotein E.	Nerve growth factor, beta.	0.454
Apoe	Picalm	MGP_CAROLIEiJ_P0077810	MGP_CAROLIEiJ_P0080627	Apolipoprotein E.	Phosphatidylinositol-binding clathrin assembly protein isoform X1.	0.582
Bdnf	Ache	MGP_CAROLIEiJ_P0053564	MGP_CAROLIEiJ_P0071461	LOW QUALITY PROTEIN: brain-derived neurotrophic factor.	Acetylcholinesterase.	0.595
Bdnf	Apoe	MGP_CAROLIEiJ_P0053564	MGP_CAROLIEiJ_P0077810	LOW QUALITY PROTEIN: brain-derived neurotrophic factor.	Apolipoprotein E.	0.666
Bdnf	Cntf	MGP_CAROLIEiJ_P0053564	MGP_CAROLIEiJ_P0048290	LOW QUALITY PROTEIN: brain-derived neurotrophic factor.	Ciliary neurotrophic factor.	0.732
Bdnf	Cxcl12	MGP_CAROLIEiJ_P0053564	MGP_CAROLIEiJ_P0075706	LOW QUALITY PROTEIN: brain-derived neurotrophic factor.	Stromal cell-derived factor 1.	0.463
Bdnf	Dcx	MGP_CAROLIEiJ_P0053564	MGP_CAROLIEiJ_P0092917	LOW QUALITY PROTEIN: brain-derived neurotrophic factor.	Neuronal migration protein doublecortin isoform X1.	0.643
Bdnf	Disc1	MGP_CAROLIEiJ_P0053564	MGP_CAROLIEiJ_P0086545	LOW QUALITY PROTEIN: brain-derived neurotrophic factor.	Disrupted in schizophrenia 1 protein isoform X1.	0.499
Bdnf	Gsk3b	MGP_CAROLIEiJ_P0053564	MGP_CAROLIEiJ_P0041562	LOW QUALITY PROTEIN: brain-derived neurotrophic factor.	Glycogen synthase kinase 3 beta.	0.661
Bdnf	Limk1	MGP_CAROLIEiJ_P0053564	MGP_CAROLIEiJ_P0071255	LOW QUALITY PROTEIN: brain-derived neurotrophic factor.	LIM domain kinase 1 isoform X1.	0.463