(30 nodes) Intestinal absorption network (Mus caroli)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Scarb1	Scavenger receptor class B member 1 isoform X1. (509 aa)
	Ugcg	Ceramide glucosyltransferase. (394 aa)
	Mogat2	2-acylglycerol O-acyltransferase 2. (334 aa)
	Kcnq1	Potassium voltage-gated channel KQT-like subfamily member 1. (669 aa)
	Ldlr	Low-density lipoprotein receptor. (861 aa)
	Ireb2	Iron-responsive element-binding protein 2. (963 aa)
	Gcnt3	Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3. (437 aa)
	Pls1	Plastin-1. (114 aa)
	Slc26a6	Solute carrier family 26 (sulfate anion transporter), member 6. (628 aa)
	Lep	Leptin. (167 aa)
	Fabp1	Fatty acid-binding protein 1, liver. (127 aa)
	Slco1a5	Solute carrier organic anion transporter family member 1A2 isoform X1. (668 aa)
	Cd36	Platelet glycoprotein 4. (472 aa)
	Aco1	Cytoplasmic aconitate hydratase. (889 aa)
	Fabp2	Fatty acid-binding protein 2, intestinal. (132 aa)
	Cel	Bile salt-stimulated lipase. (599 aa)
	Pnlip	Pancreatic triacylglycerol lipase isoform X1. (465 aa)
	Tjp2	Tight junction protein ZO-2 isoform X1. (1167 aa)
	Npc1	Niemann-Pick C1 protein isoform X1. (1277 aa)
	Abcg8	ATP-binding cassette, subfamily G (WHITE), member 8 (sterolin 2). (673 aa)
	Abcg5	ATP-binding cassette, subfamily G (WHITE), member 5 (sterolin 1). (652 aa)
	Ezr	Villin 2 (ezrin). (586 aa)
	Lima1	LIM domain and actin-binding protein 1. (754 aa)
	Vdr	Vitamin D3 receptor. (423 aa)
	Npc1l1	Niemann-Pick C1-like protein 1. (1333 aa)
	F11r	Junctional adhesion molecule 1. (300 aa)
	Rsc1a1	Regulatory solute carrier protein family 1 member 1. (584 aa)
	Vil1	Villin-1 isoform X1. (827 aa)
	MGP_CAROLIEiJ_P0065629	annotation not available (584 aa)
	Slc5a1	Solute carrier family 5 (sodium/glucose cotransporter), member 1. (665 aa)

Your Current Organism:

Mus caroli

NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Abcg5	Abcg8	MGP_CAROLIEiJ_P0045749	MGP_CAROLIEiJ_P0045753	ATP-binding cassette, subfamily G (WHITE), member 5 (sterolin 1).	ATP-binding cassette, subfamily G (WHITE), member 8 (sterolin 2).	0.999
Abcg5	Npc1l1	MGP_CAROLIEiJ_P0045749	MGP_CAROLIEiJ_P0025588	ATP-binding cassette, subfamily G (WHITE), member 5 (sterolin 1).	Niemann-Pick C1-like protein 1.	0.755
Abcg5	Scarb1	MGP_CAROLIEiJ_P0045749	MGP_CAROLIEiJ_P0070943	ATP-binding cassette, subfamily G (WHITE), member 5 (sterolin 1).	Scavenger receptor class B member 1 isoform X1.	0.643
Abcg5	Slco1a5	MGP_CAROLIEiJ_P0045749	MGP_CAROLIEiJ_P0076685	ATP-binding cassette, subfamily G (WHITE), member 5 (sterolin 1).	Solute carrier organic anion transporter family member 1A2 isoform X1.	0.405
Abcg8	Abcg5	MGP_CAROLIEiJ_P0045753	MGP_CAROLIEiJ_P0045749	ATP-binding cassette, subfamily G (WHITE), member 8 (sterolin 2).	ATP-binding cassette, subfamily G (WHITE), member 5 (sterolin 1).	0.999
Abcg8	Npc1	MGP_CAROLIEiJ_P0045753	MGP_CAROLIEiJ_P0046057	ATP-binding cassette, subfamily G (WHITE), member 8 (sterolin 2).	Niemann-Pick C1 protein isoform X1.	0.526
Abcg8	Npc1l1	MGP_CAROLIEiJ_P0045753	MGP_CAROLIEiJ_P0025588	ATP-binding cassette, subfamily G (WHITE), member 8 (sterolin 2).	Niemann-Pick C1-like protein 1.	0.741
Abcg8	Scarb1	MGP_CAROLIEiJ_P0045753	MGP_CAROLIEiJ_P0070943	ATP-binding cassette, subfamily G (WHITE), member 8 (sterolin 2).	Scavenger receptor class B member 1 isoform X1.	0.603
Aco1	Ireb2	MGP_CAROLIEiJ_P0061770	MGP_CAROLIEiJ_P0087920	Cytoplasmic aconitate hydratase.	Iron-responsive element-binding protein 2.	0.630
Cd36	Fabp1	MGP_CAROLIEiJ_P0066748	MGP_CAROLIEiJ_P0074212	Platelet glycoprotein 4.	Fatty acid-binding protein 1, liver.	0.758
Cd36	Fabp2	MGP_CAROLIEiJ_P0066748	MGP_CAROLIEiJ_P0060304	Platelet glycoprotein 4.	Fatty acid-binding protein 2, intestinal.	0.613
Cd36	Lep	MGP_CAROLIEiJ_P0066748	MGP_CAROLIEiJ_P0072886	Platelet glycoprotein 4.	Leptin.	0.562
Cd36	Npc1l1	MGP_CAROLIEiJ_P0066748	MGP_CAROLIEiJ_P0025588	Platelet glycoprotein 4.	Niemann-Pick C1-like protein 1.	0.519
Cel	Mogat2	MGP_CAROLIEiJ_P0050566	MGP_CAROLIEiJ_P0080823	Bile salt-stimulated lipase.	2-acylglycerol O-acyltransferase 2.	0.901
Cel	Npc1l1	MGP_CAROLIEiJ_P0050566	MGP_CAROLIEiJ_P0025588	Bile salt-stimulated lipase.	Niemann-Pick C1-like protein 1.	0.515
Cel	Pnlip	MGP_CAROLIEiJ_P0050566	MGP_CAROLIEiJ_P0049261	Bile salt-stimulated lipase.	Pancreatic triacylglycerol lipase isoform X1.	0.996
Cel	Scarb1	MGP_CAROLIEiJ_P0050566	MGP_CAROLIEiJ_P0070943	Bile salt-stimulated lipase.	Scavenger receptor class B member 1 isoform X1.	0.514
Ezr	Pls1	MGP_CAROLIEiJ_P0042623	MGP_CAROLIEiJ_P0089099	Villin 2 (ezrin).	Plastin-1.	0.830
Ezr	Vil1	MGP_CAROLIEiJ_P0042623	MGP_CAROLIEiJ_P0018291	Villin 2 (ezrin).	Villin-1 isoform X1.	0.421
F11r	Tjp2	MGP_CAROLIEiJ_P0021219	MGP_CAROLIEiJ_P0048410	Junctional adhesion molecule 1.	Tight junction protein ZO-2 isoform X1.	0.982