STRINGSTRING
Itga4 Itga4 Rnf165 Rnf165 Fbxo45 Fbxo45 Slitrk6 Slitrk6 Pou4f1 Pou4f1 Isl1 Isl1 Edn1 Edn1 Nptx1 Nptx1 Gabrb2 Gabrb2 Adarb1 Adarb1 Serpine2 Serpine2 Sulf1 Sulf1 Nrp1 Nrp1 Ednra Ednra Unc13a Unc13a Gabrb3 Gabrb3 Gabra5 Gabra5 Ntf5 Ntf5 Prkcg Prkcg MGP_CAROLIEiJ_P0075713 MGP_CAROLIEiJ_P0075713 Lrig1 Lrig1 Fgfr3 Fgfr3 Sema3a Sema3a Ece1 Ece1 Unc13b Unc13b Chd7 Chd7 Col25a1 Col25a1 Vcam1 Vcam1 Lrig2 Lrig2 Ntrk1 Ntrk1 Sulf2 Sulf2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Itga4Integrin alpha 4. (1032 aa)
Rnf165E3 ubiquitin-protein ligase RNF165. (347 aa)
Fbxo45F-box/SPRY domain-containing protein 1. (286 aa)
Slitrk6SLIT and NTRK-like protein 6. (840 aa)
Pou4f1POU domain, class 4, transcription factor 1. (421 aa)
Isl1Insulin gene enhancer protein ISL-1 isoform X1. (349 aa)
Edn1Endothelin-1. (202 aa)
Nptx1Neuronal pentraxin-1. (432 aa)
Gabrb2Gamma-aminobutyric acid receptor subunit beta-2 isoform X1. (512 aa)
Adarb1Double stranded RNA-specific editase B. (711 aa)
Serpine2Glia-derived nexin. (397 aa)
Sulf1Extracellular sulfatase Sulf-1 isoform X1. (870 aa)
Nrp1Neuropilin-1 isoform X1. (923 aa)
EdnraEndothelin receptor type A. (427 aa)
Unc13aProtein unc-13 homolog A. (1733 aa)
Gabrb3Gamma-aminobutyric acid (GABA) A receptor, subunit beta 3. (507 aa)
Gabra5Gamma-aminobutyric acid receptor subunit alpha-5. (463 aa)
Ntf5Neurotrophin 4. (209 aa)
PrkcgProtein kinase C gamma type isoform X1. (697 aa)
MGP_CAROLIEiJ_P0075713annotation not available (1024 aa)
Lrig1Leucine-rich repeats and immunoglobulin-like domains protein 1. (1098 aa)
Fgfr3Fibroblast growth factor receptor 3. (802 aa)
Sema3aSemaphorin-3A. (772 aa)
Ece1Endothelin-converting enzyme 1 isoform X1. (753 aa)
Unc13bProtein unc-13 homolog B isoform X1. (1609 aa)
Chd7Chromodomain-helicase-DNA-binding protein 7. (2986 aa)
Col25a1Collagen alpha-1(XXV) chain isoform X1. (666 aa)
Vcam1Vascular cell adhesion molecule 1. (739 aa)
Lrig2Leucine-rich repeats and immunoglobulin-like domains protein 2 isoform X1. (1054 aa)
Ntrk1High affinity nerve growth factor receptor isoform X1. (799 aa)
Sulf2Extracellular sulfatase Sulf-2. (875 aa)
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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