STRINGSTRING
Dst Dst Des Des Gfap Gfap Upp2 Upp2 Snai1 Snai1 Nes Nes Cdh1 Cdh1 Acta2 Acta2 Cdh2 Cdh2 Vim Vim Zeb1 Zeb1 Fer Fer Vmac Vmac Aif1 Aif1 Snai2 Snai2 Prph Prph
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DstDystonin isoform X1. (7715 aa)
DesDesmin. (469 aa)
GfapGlial fibrillary acidic protein. (426 aa)
Upp2Uridine phosphorylase 2. (338 aa)
Snai1Zinc finger protein SNAI1. (264 aa)
NesNestin. (1956 aa)
Cdh1Cadherin 1, type 1, E-cadherin. (884 aa)
Acta2Actin, aortic smooth muscle. (377 aa)
Cdh2Cadherin 2, type 1, N-cadherin. (906 aa)
VimVimentin. (466 aa)
Zeb1Zinc finger E-box-binding homeobox 1. (1114 aa)
FerTyrosine-protein kinase Fer isoform X1. (453 aa)
VmacVimentin-type intermediate filament-associated coiled-coil protein isoform X1. (174 aa)
Aif1Allograft inflammatory factor 1 isoform X1. (147 aa)
Snai2Zinc finger protein SNAI2. (269 aa)
PrphPeripherin isoform X1. (475 aa)
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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