STRINGSTRING
Col9a1 Col9a1 Col4a4 Col4a4 Col4a3 Col4a3 Col6a3 Col6a3 Lamc2 Lamc2 Lamc1 Lamc1 Tnr Tnr Tnn Tnn Lamb3 Lamb3 Lama2 Lama2 Lama4 Lama4 Col6a2 Col6a2 Col6a1 Col6a1 Itga7 Itga7 Hmmr Hmmr Gp1ba Gp1ba Vtn Vtn Chad Chad Col1a1 Col1a1 Itga3 Itga3 Itgb3 Itgb3 Lamb1 Lamb1 Itgb8 Itgb8 Thbs4 Thbs4 Sv2c Sv2c Itga2 Itga2 Itga1 Itga1 Col2a1 Col2a1 Itgb7 Itgb7 Itga5 Itga5 Gp1bb Gp1bb Gp5 Gp5 Itgb5 Itgb5 Cd47 Cd47 Lama1 Lama1 Lama3 Lama3 Itga8 Itga8 Lamc3 Lamc3 Itgb6 Itgb6 Itga6 Itga6 Itga4 Itga4 Itgav Itgav Cd44 Cd44 Thbs1 Thbs1 Sdc4 Sdc4 Col9a3 Col9a3 Frem2 Frem2 Thbs3 Thbs3 Sv2a Sv2a Itga10 Itga10 Npnt Npnt Tnc Tnc Frem1 Frem1 Col9a2 Col9a2 Hspg2 Hspg2 Agrn Agrn Cd36 Cd36 Reln Reln Fras1 Fras1 Dspp Dspp Dmp1 Dmp1 Ibsp Ibsp Spp1 Spp1 Col1a2 Col1a2 Vwf Vwf Gp6 Gp6 Sv2b Sv2b Col4a1 Col4a1 Col4a2 Col4a2 Comp Comp Itgb1 Itgb1 Itga11 Itga11 Col6a6 Col6a6 Col6a5 Col6a5 Col6a4 Col6a4 Dag1 Dag1 Lamb2 Lamb2 Itga9 Itga9 Col4a6 Col4a6 Col4a5 Col4a5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Col9a1Collagen alpha-1(IX) chain isoform X1. (921 aa)
Col4a4Collagen alpha-4(IV) chain. (1647 aa)
Col4a3Collagen alpha-3(IV) chain. (1669 aa)
Col6a3Collagen alpha-3(VI) chain. (3254 aa)
Lamc2Laminin subunit gamma-2. (1193 aa)
Lamc1Laminin subunit gamma-1 isoform X1. (1607 aa)
TnrTenascin-R isoform X1. (1358 aa)
TnnTenascin-N. (1560 aa)
Lamb3Laminin subunit beta-3 isoform X1. (1168 aa)
Lama2Laminin subunit alpha-2. (3118 aa)
Lama4Laminin subunit alpha-4 isoform X1. (1816 aa)
Col6a2Collagen alpha-2(VI) chain. (1034 aa)
Col6a1Collagen alpha-1(VI) chain. (1025 aa)
Itga7Integrin alpha-7 isoform X1. (1136 aa)
HmmrHyaluronan mediated motility receptor. (773 aa)
Gp1baPlatelet glycoprotein Ib alpha chain. (718 aa)
VtnVitronectin. (478 aa)
ChadChondroadherin. (358 aa)
Col1a1Collagen alpha-1(I) chain isoform X1. (1452 aa)
Itga3Integrin alpha-3 isoform X1. (1068 aa)
Itgb3Integrin beta 3. (787 aa)
Lamb1Laminin subunit beta-1 isoform X1. (1834 aa)
Itgb8Integrin beta-8 isoform X1. (767 aa)
Thbs4Thrombospondin 2/3/4/5. (963 aa)
Sv2cMFS transporter, VNT family, synaptic vesicle glycoprotein 2. (727 aa)
Itga2Integrin alpha 2. (1178 aa)
Itga1Integrin alpha 1. (1179 aa)
Col2a1Collagen alpha-1(II) chain isoform X1. (1487 aa)
Itgb7Integrin beta 7. (806 aa)
Itga5Integrin alpha 5. (1053 aa)
Gp1bbPlatelet glycoprotein Ib beta chain. (214 aa)
Gp5Platelet glycoprotein V. (567 aa)
Itgb5Integrin beta 5. (815 aa)
Cd47CD47 antigen (Rh-related antigen, integrin-associated signal transducer). (324 aa)
Lama1Laminin subunit alpha-1. (3083 aa)
Lama3Laminin subunit alpha-3. (3312 aa)
Itga8Integrin alpha-8 isoform X1. (1062 aa)
Lamc3Laminin subunit gamma-3. (1581 aa)
Itgb6Integrin beta 6. (787 aa)
Itga6Integrin alpha 6. (1091 aa)
Itga4Integrin alpha 4. (1032 aa)
ItgavIntegrin alpha-V isoform X1. (1046 aa)
Cd44CD44 antigen isoform X1. (778 aa)
Thbs1Thrombospondin 1. (1171 aa)
Sdc4Syndecan 4. (198 aa)
Col9a3Collagen alpha-3(IX) chain. (662 aa)
Frem2FRAS1-related extracelluar matrix protein 1/2. (3158 aa)
Thbs3Thrombospondin-3 isoform X1. (956 aa)
Sv2aMFS transporter, VNT family, synaptic vesicle glycoprotein 2. (742 aa)
Itga10Integrin alpha-10 isoform X1. (1167 aa)
NpntNephronectin isoform X1. (609 aa)
TncTenascin isoform X1. (2110 aa)
Frem1FRAS1-related extracellular matrix protein 1 isoform X1. (2191 aa)
Col9a2Collagen alpha-2(IX) chain. (688 aa)
Hspg2Basement membrane-specific heparan sulfate proteoglycan core protein. (4347 aa)
AgrnAgrin isoform X1. (2042 aa)
Cd36Platelet glycoprotein 4. (472 aa)
RelnReelin. (3461 aa)
Fras1Extracellular matrix protein FRAS1. (4010 aa)
DsppDentin sialophosphoprotein. (983 aa)
Dmp1Dentin matrix acidic phosphoprotein 1 isoform X1. (504 aa)
IbspBone sialoprotein 2 isoform X1. (322 aa)
Spp1Secreted phosphoprotein 1. (296 aa)
Col1a2Collagen alpha-2(I) chain. (1372 aa)
VwfLOW QUALITY PROTEIN: von Willebrand factor. (2421 aa)
Gp6Platelet glycoprotein VI isoform X1. (314 aa)
Sv2bMFS transporter, VNT family, synaptic vesicle glycoprotein 2. (683 aa)
Col4a1Collagen alpha-1(IV) chain. (1669 aa)
Col4a2Collagen alpha-2(IV) chain. (1707 aa)
CompCartilage oligomeric matrix protein isoform X1. (755 aa)
Itgb1Integrin beta 1. (798 aa)
Itga11Integrin alpha 11. (1188 aa)
Col6a6Collagen alpha-6(VI) chain isoform X1. (2265 aa)
Col6a5Collagen alpha-5(VI) chain. (2640 aa)
Col6a4Collagen alpha-4(VI) chain. (2309 aa)
Dag1Dystroglycan 1. (893 aa)
Lamb2Laminin subunit beta-2. (1799 aa)
Itga9Integrin alpha 9. (1036 aa)
Col4a6Collagen alpha-6(IV) chain-like. (1691 aa)
Col4a5Collagen alpha-5(IV) chain isoform X1. (1691 aa)
Your Current Organism:
Mus caroli
NCBI taxonomy Id: 10089
Other names: M. caroli, Mus formosanus, Ryukyu mouse, ricefield mouse
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