(8 nodes) Polysomal ribosome, and Ribosomal L28e/Mak16 network (Mus musculus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Rps11	40S ribosomal protein S11. (158 aa)
	Rpl19	60S ribosomal protein L19. (196 aa)
	Rpl24	60S ribosomal protein L24; Belongs to the eukaryotic ribosomal protein eL24 family. (157 aa)
	Rpl28	60S ribosomal protein L28; Component of the large ribosomal subunit. Belongs to the eukaryotic ribosomal protein eL28 family. (137 aa)
	Rps25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (125 aa)
	Rpl36	60S ribosomal protein L36; Component of the large ribosomal subunit. (105 aa)
	Rpl11	60S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...] (178 aa)
	Rpl8	60S ribosomal protein L8; Component of the large ribosomal subunit. Belongs to the universal ribosomal protein uL2 family. (257 aa)

Your Current Organism:

Mus musculus

NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Rpl11	Rpl19	ENSMUSP00000099595	ENSMUSP00000017548	60S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...]	60S ribosomal protein L19.	0.999
Rpl11	Rpl24	ENSMUSP00000099595	ENSMUSP00000023269	60S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...]	60S ribosomal protein L24; Belongs to the eukaryotic ribosomal protein eL24 family.	0.999
Rpl11	Rpl28	ENSMUSP00000099595	ENSMUSP00000032597	60S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...]	60S ribosomal protein L28; Component of the large ribosomal subunit. Belongs to the eukaryotic ribosomal protein eL28 family.	0.999
Rpl11	Rpl36	ENSMUSP00000099595	ENSMUSP00000079340	60S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...]	60S ribosomal protein L36; Component of the large ribosomal subunit.	0.999
Rpl11	Rpl8	ENSMUSP00000099595	ENSMUSP00000155657	60S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...]	60S ribosomal protein L8; Component of the large ribosomal subunit. Belongs to the universal ribosomal protein uL2 family.	0.999
Rpl11	Rps11	ENSMUSP00000099595	ENSMUSP00000003521	60S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...]	40S ribosomal protein S11.	0.999
Rpl11	Rps25	ENSMUSP00000099595	ENSMUSP00000079180	60S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...]	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
Rpl19	Rpl11	ENSMUSP00000017548	ENSMUSP00000099595	60S ribosomal protein L19.	60S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...]	0.999
Rpl19	Rpl24	ENSMUSP00000017548	ENSMUSP00000023269	60S ribosomal protein L19.	60S ribosomal protein L24; Belongs to the eukaryotic ribosomal protein eL24 family.	0.999
Rpl19	Rpl28	ENSMUSP00000017548	ENSMUSP00000032597	60S ribosomal protein L19.	60S ribosomal protein L28; Component of the large ribosomal subunit. Belongs to the eukaryotic ribosomal protein eL28 family.	0.999
Rpl19	Rpl36	ENSMUSP00000017548	ENSMUSP00000079340	60S ribosomal protein L19.	60S ribosomal protein L36; Component of the large ribosomal subunit.	0.999
Rpl19	Rpl8	ENSMUSP00000017548	ENSMUSP00000155657	60S ribosomal protein L19.	60S ribosomal protein L8; Component of the large ribosomal subunit. Belongs to the universal ribosomal protein uL2 family.	0.999
Rpl19	Rps11	ENSMUSP00000017548	ENSMUSP00000003521	60S ribosomal protein L19.	40S ribosomal protein S11.	0.999
Rpl19	Rps25	ENSMUSP00000017548	ENSMUSP00000079180	60S ribosomal protein L19.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
Rpl24	Rpl11	ENSMUSP00000023269	ENSMUSP00000099595	60S ribosomal protein L24; Belongs to the eukaryotic ribosomal protein eL24 family.	60S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...]	0.999
Rpl24	Rpl19	ENSMUSP00000023269	ENSMUSP00000017548	60S ribosomal protein L24; Belongs to the eukaryotic ribosomal protein eL24 family.	60S ribosomal protein L19.	0.999
Rpl24	Rpl28	ENSMUSP00000023269	ENSMUSP00000032597	60S ribosomal protein L24; Belongs to the eukaryotic ribosomal protein eL24 family.	60S ribosomal protein L28; Component of the large ribosomal subunit. Belongs to the eukaryotic ribosomal protein eL28 family.	0.999
Rpl24	Rpl36	ENSMUSP00000023269	ENSMUSP00000079340	60S ribosomal protein L24; Belongs to the eukaryotic ribosomal protein eL24 family.	60S ribosomal protein L36; Component of the large ribosomal subunit.	0.999
Rpl24	Rpl8	ENSMUSP00000023269	ENSMUSP00000155657	60S ribosomal protein L24; Belongs to the eukaryotic ribosomal protein eL24 family.	60S ribosomal protein L8; Component of the large ribosomal subunit. Belongs to the universal ribosomal protein uL2 family.	0.999
Rpl24	Rps11	ENSMUSP00000023269	ENSMUSP00000003521	60S ribosomal protein L24; Belongs to the eukaryotic ribosomal protein eL24 family.	40S ribosomal protein S11.	0.999