(16 nodes) Cytosolic small ribosomal subunit network (Mus musculus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Rps18	40S ribosomal protein S18; Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA. (152 aa)
	Rps26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	Rps3a1	40S ribosomal protein S3a; May play a role during erythropoiesis through regulation of transcription factor DDIT3. (264 aa)
	Rps4x	40S ribosomal protein S4, X isoform; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
	Rps7	40S ribosomal protein S7; Required for rRNA maturation. (194 aa)
	Rps17	40S ribosomal protein S17; Belongs to the eukaryotic ribosomal protein eS17 family. (135 aa)
	Rps8	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
	Rps6	40S ribosomal protein S6; May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA. (249 aa)
	Rps19	40S ribosomal protein S19; Required for pre-rRNA processing and maturation of 40S ribosomal subunits; Belongs to the eukaryotic ribosomal protein eS19 family. (145 aa)
	Rps9	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
	Rps15a	40S ribosomal protein S15a; Structural component of the ribosome. Required for proper erythropoiesis; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	Rps27	Ribosomal protein S27. (84 aa)
	Rps28	40S ribosomal protein S28; Belongs to the eukaryotic ribosomal protein eS28 family. (69 aa)
	Rpl32	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family. (135 aa)
	Rps12	40S ribosomal protein S12. (132 aa)
	Rps14	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)

Your Current Organism:

Mus musculus

NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Rpl32	Rps12	ENSMUSP00000145350	ENSMUSP00000151305	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.	40S ribosomal protein S12.	0.999
Rpl32	Rps14	ENSMUSP00000145350	ENSMUSP00000157948	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.999
Rpl32	Rps15a	ENSMUSP00000145350	ENSMUSP00000119975	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.	40S ribosomal protein S15a; Structural component of the ribosome. Required for proper erythropoiesis; Belongs to the universal ribosomal protein uS8 family.	0.999
Rpl32	Rps17	ENSMUSP00000145350	ENSMUSP00000079628	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.	40S ribosomal protein S17; Belongs to the eukaryotic ribosomal protein eS17 family.	0.998
Rpl32	Rps18	ENSMUSP00000145350	ENSMUSP00000008812	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.	40S ribosomal protein S18; Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA.	0.999
Rpl32	Rps19	ENSMUSP00000145350	ENSMUSP00000104068	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.	40S ribosomal protein S19; Required for pre-rRNA processing and maturation of 40S ribosomal subunits; Belongs to the eukaryotic ribosomal protein eS19 family.	0.999
Rpl32	Rps26	ENSMUSP00000145350	ENSMUSP00000026420	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
Rpl32	Rps27	ENSMUSP00000145350	ENSMUSP00000132102	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.	Ribosomal protein S27.	0.997
Rpl32	Rps28	ENSMUSP00000145350	ENSMUSP00000134615	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.	40S ribosomal protein S28; Belongs to the eukaryotic ribosomal protein eS28 family.	0.999
Rpl32	Rps3a1	ENSMUSP00000145350	ENSMUSP00000029722	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.	40S ribosomal protein S3a; May play a role during erythropoiesis through regulation of transcription factor DDIT3.	0.999
Rpl32	Rps4x	ENSMUSP00000145350	ENSMUSP00000033683	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.	40S ribosomal protein S4, X isoform; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999
Rpl32	Rps6	ENSMUSP00000145350	ENSMUSP00000099878	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.	40S ribosomal protein S6; May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA.	0.999
Rpl32	Rps7	ENSMUSP00000145350	ENSMUSP00000073880	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.	40S ribosomal protein S7; Required for rRNA maturation.	0.999
Rpl32	Rps8	ENSMUSP00000145350	ENSMUSP00000099757	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.999
Rpl32	Rps9	ENSMUSP00000145350	ENSMUSP00000104265	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.999
Rps12	Rpl32	ENSMUSP00000151305	ENSMUSP00000145350	40S ribosomal protein S12.	60S ribosomal protein L32; Belongs to the eukaryotic ribosomal protein eL32 family.	0.999
Rps12	Rps14	ENSMUSP00000151305	ENSMUSP00000157948	40S ribosomal protein S12.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.999
Rps12	Rps15a	ENSMUSP00000151305	ENSMUSP00000119975	40S ribosomal protein S12.	40S ribosomal protein S15a; Structural component of the ribosome. Required for proper erythropoiesis; Belongs to the universal ribosomal protein uS8 family.	0.999
Rps12	Rps17	ENSMUSP00000151305	ENSMUSP00000079628	40S ribosomal protein S12.	40S ribosomal protein S17; Belongs to the eukaryotic ribosomal protein eS17 family.	0.996
Rps12	Rps18	ENSMUSP00000151305	ENSMUSP00000008812	40S ribosomal protein S12.	40S ribosomal protein S18; Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA.	0.998