(6 nodes) Omegasome, and Schlafen family network (Mus musculus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Trim30d	Tripartite motif-containing 30D. (497 aa)
	Slfn2	Schlafen family member 2. (378 aa)
	Slfn8	Schlafen family member 8; Endoribonuclease that cleaves tRNAs and rRNAs. Cleaves tRNAs 11 nucleotides from the 3'-terminus at the acceptor stem. May be involved in immune system via regulation of inflammation. (910 aa)
	Trim12c	Tripartite motif-containing 12C. (497 aa)
	Ifi209	Pyrin and HIN domain-containing protein 1. (420 aa)
	Trim5	Tripartite motif-containing 5. (497 aa)

Your Current Organism:

Mus musculus

NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ifi209	Slfn8	ENSMUSP00000061900	ENSMUSP00000040060	Pyrin and HIN domain-containing protein 1.	Schlafen family member 8; Endoribonuclease that cleaves tRNAs and rRNAs. Cleaves tRNAs 11 nucleotides from the 3'-terminus at the acceptor stem. May be involved in immune system via regulation of inflammation.	0.574
Ifi209	Trim12c	ENSMUSP00000061900	ENSMUSP00000060100	Pyrin and HIN domain-containing protein 1.	Tripartite motif-containing 12C.	0.417
Ifi209	Trim30d	ENSMUSP00000061900	ENSMUSP00000033211	Pyrin and HIN domain-containing protein 1.	Tripartite motif-containing 30D.	0.540
Slfn2	Slfn8	ENSMUSP00000035562	ENSMUSP00000040060	Schlafen family member 2.	Schlafen family member 8; Endoribonuclease that cleaves tRNAs and rRNAs. Cleaves tRNAs 11 nucleotides from the 3'-terminus at the acceptor stem. May be involved in immune system via regulation of inflammation.	0.474
Slfn8	Ifi209	ENSMUSP00000040060	ENSMUSP00000061900	Schlafen family member 8; Endoribonuclease that cleaves tRNAs and rRNAs. Cleaves tRNAs 11 nucleotides from the 3'-terminus at the acceptor stem. May be involved in immune system via regulation of inflammation.	Pyrin and HIN domain-containing protein 1.	0.574
Slfn8	Slfn2	ENSMUSP00000040060	ENSMUSP00000035562	Schlafen family member 8; Endoribonuclease that cleaves tRNAs and rRNAs. Cleaves tRNAs 11 nucleotides from the 3'-terminus at the acceptor stem. May be involved in immune system via regulation of inflammation.	Schlafen family member 2.	0.474
Slfn8	Trim30d	ENSMUSP00000040060	ENSMUSP00000033211	Schlafen family member 8; Endoribonuclease that cleaves tRNAs and rRNAs. Cleaves tRNAs 11 nucleotides from the 3'-terminus at the acceptor stem. May be involved in immune system via regulation of inflammation.	Tripartite motif-containing 30D.	0.641
Trim12c	Ifi209	ENSMUSP00000060100	ENSMUSP00000061900	Tripartite motif-containing 12C.	Pyrin and HIN domain-containing protein 1.	0.417
Trim12c	Trim30d	ENSMUSP00000060100	ENSMUSP00000033211	Tripartite motif-containing 12C.	Tripartite motif-containing 30D.	0.922
Trim12c	Trim5	ENSMUSP00000060100	ENSMUSP00000095781	Tripartite motif-containing 12C.	Tripartite motif-containing 5.	0.927
Trim30d	Ifi209	ENSMUSP00000033211	ENSMUSP00000061900	Tripartite motif-containing 30D.	Pyrin and HIN domain-containing protein 1.	0.540
Trim30d	Slfn8	ENSMUSP00000033211	ENSMUSP00000040060	Tripartite motif-containing 30D.	Schlafen family member 8; Endoribonuclease that cleaves tRNAs and rRNAs. Cleaves tRNAs 11 nucleotides from the 3'-terminus at the acceptor stem. May be involved in immune system via regulation of inflammation.	0.641
Trim30d	Trim12c	ENSMUSP00000033211	ENSMUSP00000060100	Tripartite motif-containing 30D.	Tripartite motif-containing 12C.	0.922
Trim30d	Trim5	ENSMUSP00000033211	ENSMUSP00000095781	Tripartite motif-containing 30D.	Tripartite motif-containing 5.	0.907
Trim5	Trim12c	ENSMUSP00000095781	ENSMUSP00000060100	Tripartite motif-containing 5.	Tripartite motif-containing 12C.	0.927
Trim5	Trim30d	ENSMUSP00000095781	ENSMUSP00000033211	Tripartite motif-containing 5.	Tripartite motif-containing 30D.	0.907