(4 nodes) Nuclear pore inner ring network (Mus musculus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Nup188	Nucleoporin NUP188 homolog; May function as a component of the nuclear pore complex (NPC). (1759 aa)
	Nup205	Nucleoporin 205. (2008 aa)
	Nup155	Nuclear pore complex protein Nup155; Essential component of nuclear pore complex. Could be essessential for embryogenesis. Nucleoporins may be involved both in binding and translocating proteins during nucleocytoplasmic transport. Belongs to the non-repetitive/WGA-negative nucleoporin family. (1391 aa)
	Gm28038	Predicted gene, 28038. (126 aa)

Your Current Organism:

Mus musculus

NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Gm28038	Nup155	ENSMUSP00000125607	ENSMUSP00000128819	Predicted gene, 28038.	Nuclear pore complex protein Nup155; Essential component of nuclear pore complex. Could be essessential for embryogenesis. Nucleoporins may be involved both in binding and translocating proteins during nucleocytoplasmic transport. Belongs to the non-repetitive/WGA-negative nucleoporin family.	0.916
Gm28038	Nup188	ENSMUSP00000125607	ENSMUSP00000065836	Predicted gene, 28038.	Nucleoporin NUP188 homolog; May function as a component of the nuclear pore complex (NPC).	0.545
Gm28038	Nup205	ENSMUSP00000125607	ENSMUSP00000039656	Predicted gene, 28038.	Nucleoporin 205.	0.913
Nup155	Gm28038	ENSMUSP00000128819	ENSMUSP00000125607	Nuclear pore complex protein Nup155; Essential component of nuclear pore complex. Could be essessential for embryogenesis. Nucleoporins may be involved both in binding and translocating proteins during nucleocytoplasmic transport. Belongs to the non-repetitive/WGA-negative nucleoporin family.	Predicted gene, 28038.	0.916
Nup155	Nup188	ENSMUSP00000128819	ENSMUSP00000065836	Nuclear pore complex protein Nup155; Essential component of nuclear pore complex. Could be essessential for embryogenesis. Nucleoporins may be involved both in binding and translocating proteins during nucleocytoplasmic transport. Belongs to the non-repetitive/WGA-negative nucleoporin family.	Nucleoporin NUP188 homolog; May function as a component of the nuclear pore complex (NPC).	0.999
Nup155	Nup205	ENSMUSP00000128819	ENSMUSP00000039656	Nuclear pore complex protein Nup155; Essential component of nuclear pore complex. Could be essessential for embryogenesis. Nucleoporins may be involved both in binding and translocating proteins during nucleocytoplasmic transport. Belongs to the non-repetitive/WGA-negative nucleoporin family.	Nucleoporin 205.	0.999
Nup188	Gm28038	ENSMUSP00000065836	ENSMUSP00000125607	Nucleoporin NUP188 homolog; May function as a component of the nuclear pore complex (NPC).	Predicted gene, 28038.	0.545
Nup188	Nup155	ENSMUSP00000065836	ENSMUSP00000128819	Nucleoporin NUP188 homolog; May function as a component of the nuclear pore complex (NPC).	Nuclear pore complex protein Nup155; Essential component of nuclear pore complex. Could be essessential for embryogenesis. Nucleoporins may be involved both in binding and translocating proteins during nucleocytoplasmic transport. Belongs to the non-repetitive/WGA-negative nucleoporin family.	0.999
Nup188	Nup205	ENSMUSP00000065836	ENSMUSP00000039656	Nucleoporin NUP188 homolog; May function as a component of the nuclear pore complex (NPC).	Nucleoporin 205.	0.999
Nup205	Gm28038	ENSMUSP00000039656	ENSMUSP00000125607	Nucleoporin 205.	Predicted gene, 28038.	0.913
Nup205	Nup155	ENSMUSP00000039656	ENSMUSP00000128819	Nucleoporin 205.	Nuclear pore complex protein Nup155; Essential component of nuclear pore complex. Could be essessential for embryogenesis. Nucleoporins may be involved both in binding and translocating proteins during nucleocytoplasmic transport. Belongs to the non-repetitive/WGA-negative nucleoporin family.	0.999
Nup205	Nup188	ENSMUSP00000039656	ENSMUSP00000065836	Nucleoporin 205.	Nucleoporin NUP188 homolog; May function as a component of the nuclear pore complex (NPC).	0.999