STRINGSTRING
Trim6 Trim6 Trim62 Trim62 Trim41 Trim41 Trim30d Trim30d Bspry Bspry Trim35 Trim35 Rnf135 Rnf135 Fsd1 Fsd1 Trim80 Trim80 Btnl1 Btnl1 Trim31 Trim31 Trim61 Trim61 Trim30a Trim30a Trim65 Trim65 Trim12c Trim12c Trim34a Trim34a Spryd4 Spryd4 Cmya5 Cmya5 Triml1 Triml1 Fsd2 Fsd2 Trim60 Trim60 Triml2 Triml2 Trim67 Trim67 Spsb3 Spsb3 Fsd1l Fsd1l Trim9 Trim9 Trim34b Trim34b Trim30c Trim30c Trim72 Trim72 Trim5 Trim5 Trim75 Trim75
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Trim6Tripartite motif-containing protein 6; E3 ubiquitin-protein ligase which ubiquitinates MYC and inhibits its transcription activation activity, maintaining the pluripotency of embryonic stem cells. Involved in the synthesis of unanchored K48-linked polyubiquitin chains which interact with and activate the serine/threonine kinase IKBKE, leading to phosphorylation of STAT1 and stimulation of an antiviral response ; Belongs to the TRIM/RBCC family. (488 aa)
Trim62E3 ubiquitin-protein ligase TRIM62; E3 ubiquitin ligase whose activity is dependent on E2 ubiquitin-conjugating enzyme UBE2D2. (475 aa)
Trim41E3 ubiquitin-protein ligase TRIM41; Functions as an E3 ligase that catalyzes the ubiquitin- mediated degradation of protein kinase C. Belongs to the TRIM/RBCC family. (630 aa)
Trim30dTripartite motif-containing 30D. (497 aa)
BspryB box and SPRY domain-containing protein; May regulate epithelial calcium transport by inhibiting TRPV5 activity. (486 aa)
Trim35Tripartite motif-containing protein 35; Reduces FGFR1-dependent tyrosine phosphorylation of PKM, inhibiting PKM-dependent lactate production, glucose metabolism, and cell growth (By similarity). Implicated in the cell death mechanism. (516 aa)
Rnf135E3 ubiquitin-protein ligase RNF135; E2-dependent E3 ubiquitin-protein ligase that functions as a RIG-I/DDX58 coreceptor in the sensing of viral RNAs in cell cytoplasm and the activation of the antiviral innate immune response. Together with the UBE2D3, UBE2N and UB2V1 E2 ligases, catalyzes the 'Lys-63'-linked polyubiquitination of RIG-I/DDX58 oligomerized on viral RNAs, an essential step in the activation of the RIG-I signaling pathway. Through a ubiquitin-independent parallel mechanism, which consists in bridging RIG-I/DDX58 filaments forming on longer viral RNAs, further activates th [...] (417 aa)
Fsd1Fibronectin type III and SPRY domain-containing protein 1; May be involved in microtubule organization and stabilization. (496 aa)
Trim80Tripartite motif-containing 80. (624 aa)
Btnl1Butyrophilin-like protein 1. (509 aa)
Trim31E3 ubiquitin-protein ligase TRIM31; May have E3 ubiquitin-protein ligase activity (By similarity). Regulator of Src-induced anchorage independent cell growth. (507 aa)
Trim61Tripartite motif-containing 61. (461 aa)
Trim30aTripartite motif-containing protein 30A; Trans-acting factor that regulates gene expression of interleukin 2 receptor alpha chain. May affect IL2R-alpha expression through cis-acting negative regulatory elements or through competition with proteins that bind to enhancer or activator sequences. Negatively regulates Toll-like receptor (TLR)-mediated activation of NFKB by promoting degradation of TAB2 and TAB3 and preventing TRAF6 autoubiquitination. Negatively regulates production of reactive oxygen species (ROS) which inhibits activation of the NLRP3 inflammasome complex. This, in turn, [...] (496 aa)
Trim65Tripartite motif-containing protein 65. (522 aa)
Trim12cTripartite motif-containing 12C. (497 aa)
Trim34aTripartite motif-containing protein 34A; May function as antiviral protein and may contribute to the defense against retroviral infections; Belongs to the TRIM/RBCC family. (485 aa)
Spryd4SPRY domain-containing protein 4. (207 aa)
Cmya5Cardiomyopathy-associated protein 5; May serve as an anchoring protein that mediates the subcellular compartmentation of protein kinase A (PKA) via binding to PRKAR2A. May attenuate calcineurin ability to induce slow-fiber gene program in muscle and may negatively modulate skeletal muscle regeneration. Plays a role in the assembly of ryanodine receptor (RYR2) clusters in striated muscle. (3676 aa)
Triml1Probable E3 ubiquitin-protein ligase TRIML1; Probable E3 ubiquitin-protein ligase which plays an important role in blastocyst development. Involved in progression of blastocyst stage and subsequent embryo development. (470 aa)
Fsd2Fibronectin type III and SPRY domain-containing protein 2. (716 aa)
Trim60Tripartite motif-containing protein 60; Belongs to the TRIM/RBCC family. (466 aa)
Triml2Tripartite motif family-like 2. (424 aa)
Trim67Tripartite motif-containing protein 67. (768 aa)
Spsb3SPRY domain-containing SOCS box protein 3; May be a substrate recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. (500 aa)
Fsd1lFSD1-like protein. (497 aa)
Trim9E3 ubiquitin-protein ligase TRIM9; E3 ubiquitin-protein ligase which ubiquitinates itself in cooperation with an E2 enzyme UBE2D2/UBC4 and serves as a targeting signal for proteasomal degradation. May play a role in regulation of neuronal functions. May act as a regulator of synaptic vesicle exocytosis by controlling the availability of SNAP25 for the SNARE complex formation; Belongs to the TRIM/RBCC family. (788 aa)
Trim34bTripartite motif-containing 34B. (485 aa)
Trim30cTripartite motif-containing 30C. (513 aa)
Trim72Tripartite motif-containing protein 72; Muscle-specific protein that plays a central role in cell membrane repair by nucleating the assembly of the repair machinery at injury sites. Specifically binds phosphatidylserine. Acts as a sensor of oxidation: upon membrane damage, entry of extracellular oxidative environment results in disulfide bond formation and homooligomerization at the injury site. This oligomerization acts as a nucleation site for recruitment of TRIM72-containing vesicles to the injury site, leading to membrane patch formation. Probably acts upstream of the Ca(2+)- depen [...] (477 aa)
Trim5Tripartite motif-containing 5. (497 aa)
Trim75Tripartite motif-containing protein 75; Belongs to the TRIM/RBCC family. (467 aa)
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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