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Vim Vim Des Des Lmnb1 Lmnb1 Krt8 Krt8 Krt18 Krt18 Krt79 Krt79 Krt4 Krt4 Krt84 Krt84 Krt83 Krt83 Krt90 Krt90 Krt1 Krt1 Krt28 Krt28 Krt23 Krt23 Krt14 Krt14 Krt13 Krt13 Krt16 Krt16 Krt19 Krt19 Krt31 Krt31 Krt24 Krt24 Krt42 Krt42 Krt27 Krt27 Krt12 Krt12 Krt6a Krt6a Krt6b Krt6b Iffo2 Iffo2 Lmnb2 Lmnb2 Gm5478 Gm5478 Nefm Nefm Nefl Nefl Krt5 Krt5 Krt71 Krt71 Krt33a Krt33a Krt2 Krt2 Krt82 Krt82 Krt20 Krt20 Krt78 Krt78 Bfsp2 Bfsp2 Iffo1 Iffo1 Krt39 Krt39 Krt32 Krt32 Krt36 Krt36 Krt15 Krt15 Sync Sync Krt10 Krt10 Krt35 Krt35 Krt26 Krt26 Krt76 Krt76 Bfsp1 Bfsp1 Nefh Nefh Nes Nes Krt86 Krt86 Krt77 Krt77 Krt87 Krt87 Krt17 Krt17 Krt80 Krt80 Krt40 Krt40 Synm Synm Krt33b Krt33b Krt7 Krt7 Krt72 Krt72 Krt73 Krt73 Gfap Gfap Gm5414 Gm5414 Krt34 Krt34 Krt81 Krt81 Krt9 Krt9 Prph Prph Krt25 Krt25 Ina Ina Krt75 Krt75 Lmna Lmna
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VimVimentin; Vimentins are class-III intermediate filaments found in various non-epithelial cells, especially mesenchymal cells. Vimentin is attached to the nucleus, endoplasmic reticulum, and mitochondria, either laterally or terminally. (466 aa)
DesDesmin; Muscle-specific type III intermediate filament essential for proper muscular structure and function. Plays a crucial role in maintaining the structure of sarcomeres, inter-connecting the Z-disks and forming the myofibrils, linking them not only to the sarcolemmal cytoskeleton, but also to the nucleus and mitochondria, thus providing strength for the muscle fiber during activity (By similarity). In adult striated muscle they form a fibrous network connecting myofibrils to each other and to the plasma membrane from the periphery of the Z-line structures. May act as a sarcomeric m [...] (469 aa)
Lmnb1Lamin-B1; Lamins are components of the nuclear lamina, a fibrous layer on the nucleoplasmic side of the inner nuclear membrane, which is thought to provide a framework for the nuclear envelope and may also interact with chromatin. (588 aa)
Krt8Keratin, type II cytoskeletal 8; Together with KRT19, helps to link the contractile apparatus to dystrophin at the costameres of striated muscle; Belongs to the intermediate filament family. (490 aa)
Krt18Keratin, type I cytoskeletal 18; When phosphorylated, plays a role in filament reorganization. Involved in the delivery of mutated CFTR to the plasma membrane. Involved in the uptake of thrombin-antithrombin complexes by hepatic cells (By similarity). Together with KRT8, is involved in interleukin-6 (IL-6)-mediated barrier protection. (423 aa)
Krt79Keratin, type II cytoskeletal 79; Belongs to the intermediate filament family. (531 aa)
Krt4Keratin, type II cytoskeletal 4. (525 aa)
Krt84Keratin, type II cuticular Hb4; Belongs to the intermediate filament family. (603 aa)
Krt83Keratin 83; Belongs to the intermediate filament family. (479 aa)
Krt90Keratin 90; Belongs to the intermediate filament family. (538 aa)
Krt1Keratin, type II cytoskeletal 1; May regulate the activity of kinases such as PKC and SRC via binding to integrin beta-1 (ITB1) and the receptor of activated protein C kinase 1 (RACK1). In complex with C1QBP is a high affinity receptor for kininogen-1/HMWK (By similarity); Belongs to the intermediate filament family. (637 aa)
Krt28Keratin, type I cytoskeletal 28; Essential for the proper assembly of types I and II keratin protein complexes and the formation of keratin intermediate filaments in the inner root sheath (irs). (462 aa)
Krt23Keratin, type I cytoskeletal 23; Belongs to the intermediate filament family. (422 aa)
Krt14Keratin, type I cytoskeletal 14; The nonhelical tail domain is involved in promoting KRT5- KRT14 filaments to self-organize into large bundles and enhances the mechanical properties involved in resilience of keratin intermediate filaments in vitro. (484 aa)
Krt13Keratin, type I cytoskeletal 13. (437 aa)
Krt16Keratin, type I cytoskeletal 16; Epidermis-specific type I keratin that plays a key role in skin. Acts as a regulator of innate immunity in response to skin barrier breach: required for some inflammatory checkpoint for the skin barrier maintenance. (469 aa)
Krt19Keratin, type I cytoskeletal 19; Involved in the organization of myofibers. Together with KRT8, helps to link the contractile apparatus to dystrophin at the costameres of striated muscle (By similarity). (403 aa)
Krt31Keratin, type I cuticular Ha1. (416 aa)
Krt24Keratin, type I cytoskeletal 24; Belongs to the intermediate filament family. (512 aa)
Krt42Keratin, type I cytoskeletal 42; Belongs to the intermediate filament family. (452 aa)
Krt27Keratin, type I cytoskeletal 27; Essential for the proper assembly of type I and type II keratin protein complexes and formation of keratin intermediate filaments in the inner root sheath (irs). (448 aa)
Krt12Keratin, type I cytoskeletal 12; May play a unique role in maintaining the normal corneal epithelial function. Together with KRT3, essential for the maintenance of corneal epithelium integrity. (487 aa)
Krt6aKeratin, type II cytoskeletal 6A; Epidermis-specific type I keratin involved in wound healing. Involved in the activation of follicular keratinocytes after wounding, while it does not play a major role in keratinocyte proliferation or migration. Participates in the regulation of epithelial migration by inhibiting the activity of SRC during wound repair. Belongs to the intermediate filament family. (553 aa)
Krt6bKeratin, type II cytoskeletal 6B; Belongs to the intermediate filament family. (554 aa)
Iffo2Intermediate filament family orphan 2; Belongs to the intermediate filament family. (512 aa)
Lmnb2Lamin-B2; Lamins are components of the nuclear lamina, a fibrous layer on the nucleoplasmic side of the inner nuclear membrane, which is thought to provide a framework for the nuclear envelope and may also interact with chromatin. (596 aa)
Gm5478Predicted pseudogene 5478; Belongs to the intermediate filament family. (535 aa)
NefmNeurofilament medium polypeptide; Neurofilaments usually contain three intermediate filament proteins: L, M, and H which are involved in the maintenance of neuronal caliber. (848 aa)
NeflNeurofilament light polypeptide; Neurofilaments usually contain three intermediate filament proteins: L, M, and H which are involved in the maintenance of neuronal caliber. (543 aa)
Krt5Keratin, type II cytoskeletal 5. (580 aa)
Krt71Keratin, type II cytoskeletal 71; Plays a central role in hair formation. Essential component of keratin intermediate filaments in the inner root sheath (IRS) of the hair follicle. (524 aa)
Krt33aKeratin, type I cuticular Ha3-I. (404 aa)
Krt2Keratin, type II cytoskeletal 2 epidermal; Probably contributes to terminal cornification (By similarity). Associated with keratinocyte activation, proliferation and keratinization (By similarity). Plays a role in the establishment of the epidermal barrier on plantar skin. (707 aa)
Krt82Keratin, type II cuticular Hb2; Belongs to the intermediate filament family. (516 aa)
Krt20Keratin, type I cytoskeletal 20; Plays a significant role in maintaining keratin filament organization in intestinal epithelia. When phosphorylated, plays a role in the secretion of mucin in the small intestine. Belongs to the intermediate filament family. (431 aa)
Krt78Keratin 78; Belongs to the intermediate filament family. (1068 aa)
Bfsp2Phakinin; Required for the correct formation and organization of lens intermediate filaments as part of a complex composed of BFSP1, BFSP2 and CRYAA. (416 aa)
Iffo1Intermediate filament family orphan 1. (562 aa)
Krt39Keratin, type I cytoskeletal 39; May play a role in late hair differentiation. (482 aa)
Krt32Keratin, type I cuticular Ha2; Belongs to the intermediate filament family. (453 aa)
Krt36Keratin, type I cuticular Ha6; Belongs to the intermediate filament family. (473 aa)
Krt15Keratin, type I cytoskeletal 15; In the absence of KRT14, makes a bona fide, but ultrastructurally distinct keratin filament network with KRT5. Belongs to the intermediate filament family. (456 aa)
SyncSyncoilin; Atypical type III intermediate filament (IF) protein that may play a supportive role in the efficient coupling of mechanical stress between the myofibril and fiber exterior. May facilitate lateral force transmission during skeletal muscle contraction. Does not form homofilaments nor heterofilaments with other IF proteins. (470 aa)
Krt10Keratin, type I cytoskeletal 10; Plays a role in the establishment of the epidermal barrier on plantar skin. (Microbial infection) Binds S.pneumoniae PsrP, mediating adherence of the bacteria to lung cell lines. Belongs to the intermediate filament family. (561 aa)
Krt35Keratin, type I cuticular Ha5. (455 aa)
Krt26Keratin, type I cytoskeletal 26; Belongs to the intermediate filament family. (462 aa)
Krt76Keratin, type II cytoskeletal 2 oral; Probably contributes to terminal cornification. (594 aa)
Bfsp1Filensin C-terminal fragment; Required for the correct formation of lens intermediate filaments as part of a complex composed of BFSP1, BFSP2 and CRYAA (By similarity). Involved in altering the calcium regulation of MIP water permeability (By similarity). (669 aa)
NefhNeurofilament heavy polypeptide; Neurofilaments usually contain three intermediate filament proteins: L, M, and H which are involved in the maintenance of neuronal caliber. NF-H has an important function in mature axons that is not subserved by the two smaller NF proteins. (1090 aa)
NesNestin; Required for brain and eye development. Promotes the disassembly of phosphorylated vimentin intermediate filaments (IF) during mitosis and may play a role in the trafficking and distribution of IF proteins and other cellular factors to daughter cells during progenitor cell division (By similarity). Required for survival, renewal and mitogen-stimulated proliferation of neural progenitor cells. (1864 aa)
Krt86Keratin, type II cuticular Hb6; Belongs to the intermediate filament family. (486 aa)
Krt77Keratin, type II cytoskeletal 1b. (572 aa)
Krt87Keratin, type II cuticular 87; Belongs to the intermediate filament family. (495 aa)
Krt17Keratin, type I cytoskeletal 17; Type I keratin involved in the formation and maintenance of various skin appendages, specifically in determining shape and orientation of hair. Required for the correct growth of hair follicles, in particular for the persistence of the anagen (growth) state. Modulates the function of TNF-alpha in the specific context of hair cycling. Regulates protein synthesis and epithelial cell growth through binding to the adapter protein SFN and by stimulating Akt/mTOR pathway. Involved in tissue repair. May be a marker of basal cell differentiation in complex epit [...] (433 aa)
Krt80Keratin, type II cytoskeletal 80; Belongs to the intermediate filament family. (452 aa)
Krt40Keratin, type I cytoskeletal 40; May play a role in late hair differentiation. (439 aa)
SynmSynemin; Type-VI intermediate filament (IF) which plays an important cytoskeletal role within the muscle cell cytoskeleton. It forms heteropolymeric IFs with desmin and/or vimentin, and via its interaction with cytoskeletal proteins alpha-dystrobrevin, dystrophin, talin-1, utrophin and vinculin, is able to link these heteropolymeric IFs to adherens-type junctions, such as to the costameres, neuromuscular junctions, and myotendinous junctions within striated muscle cells (By similarity). (1561 aa)
Krt33bKeratin, type I cuticular Ha3-II; Belongs to the intermediate filament family. (404 aa)
Krt7Keratin, type II cytoskeletal 7; Blocks interferon-dependent interphase and stimulates DNA synthesis in cells. (457 aa)
Krt72Keratin, type II cytoskeletal 72; Has a role in hair formation. Specific component of keratin intermediate filaments in the inner root sheath (IRS) of the hair follicle (By similarity). (520 aa)
Krt73Keratin, type II cytoskeletal 73; Has a role in hair formation. Specific component of keratin intermediate filaments in the inner root sheath (IRS) of the hair follicle (By similarity). (539 aa)
GfapGlial fibrillary acidic protein; GFAP, a class-III intermediate filament, is a cell-specific marker that, during the development of the central nervous system, distinguishes astrocytes from other glial cells. (430 aa)
Gm5414Type II keratin Kb14; Belongs to the intermediate filament family. (552 aa)
Krt34Keratin, type I cuticular Ha4; Belongs to the intermediate filament family. (392 aa)
Krt81Keratin, type II cuticular Hb1. (481 aa)
Krt9Keratin, type I cytoskeletal 9; May serve an important special function either in the mature palmar and plantar skin tissue or in the morphogenetic program of the formation of these tissues. Plays a role in keratin filament assembly (By similarity). Plays an essential role in the correct development of sperm; Belongs to the intermediate filament family. (743 aa)
PrphPeripherin; Class-III neuronal intermediate filament protein; Belongs to the intermediate filament family. (507 aa)
Krt25Keratin, type I cytoskeletal 25; Essential for the proper assembly of type I and type II keratin protein complexes and formation of keratin intermediate filaments in the inner root sheath (irs). Plays a role in the cytoskeleton organization (By similarity). (446 aa)
InaAlpha-internexin; Class-IV neuronal intermediate filament that is able to self- assemble. It is involved in the morphogenesis of neurons. It may form an independent structural network without the involvement of other neurofilaments or it may cooperate with NF-L to form the filamentous backbone to which NF-M and NF-H attach to form the cross-bridges (By similarity). (501 aa)
Krt75Keratin, type II cytoskeletal 75; Plays a central role in hair and nail formation. Essential component of keratin intermediate filaments in the companion layer of the hair follicle (By similarity). (551 aa)
LmnaPrelamin-A/C; Lamins are components of the nuclear lamina, a fibrous layer on the nucleoplasmic side of the inner nuclear membrane, which is thought to provide a framework for the nuclear envelope and may also interact with chromatin. Lamin A and C are present in equal amounts in the lamina of mammals. Plays an important role in nuclear assembly, chromatin organization, nuclear membrane and telomere dynamics. Required for normal development of peripheral nervous system and skeletal muscle and for muscle satellite cell proliferation. Required for osteoblastogenesis and bone formation. A [...] (665 aa)
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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