STRINGSTRING
Stx6 Stx6 Vamp4 Vamp4 Ykt6 Ykt6 Stx8 Stx8 Gosr1 Gosr1 Gosr2 Gosr2 Scfd1 Scfd1 Vti1b Vti1b Snap29 Snap29 Bnip1 Bnip1 MGP_SPRETEiJ_P0049970 MGP_SPRETEiJ_P0049970 Vti1a Vti1a Napb Napb Stx16 Stx16 Sec22b Sec22b Stx17 Stx17 Stx12 Stx12 Stx18 Stx18 Bet1 Bet1 Vamp8 Vamp8 MGP_SPRETEiJ_P0086490 MGP_SPRETEiJ_P0086490 Use1 Use1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Stx6Syntaxin 6. (255 aa)
Vamp4Vesicle-associated membrane protein 4. (119 aa)
Ykt6YKT6 v-SNARE homolog (S. cerevisiae). (198 aa)
Stx8Syntaxin 8. (236 aa)
Gosr1Golgi SNAP receptor complex member 1. (250 aa)
Gosr2Golgi SNAP receptor complex member 2. (212 aa)
Scfd1Sec1 family domain containing 1. (617 aa)
Vti1bVesicle transport through interaction with t-SNAREs 1B. (232 aa)
Snap29Synaptosomal-associated protein 29. (260 aa)
Bnip1BCL2/adenovirus E1B interacting protein 1. (228 aa)
MGP_SPRETEiJ_P0049970annotation not available (440 aa)
Vti1aVesicle transport through interaction with t-SNAREs 1A. (217 aa)
NapbN-ethylmaleimide sensitive fusion protein attachment protein beta. (298 aa)
Stx16Syntaxin 16. (327 aa)
Sec22bSEC22 homolog B, vesicle trafficking protein. (215 aa)
Stx17Syntaxin 17. (301 aa)
Stx12Syntaxin 12. (274 aa)
Stx18Syntaxin 18. (334 aa)
Bet1Bet1 golgi vesicular membrane trafficking protein. (118 aa)
Vamp8Vesicle-associated membrane protein 8. (101 aa)
MGP_SPRETEiJ_P0086490annotation not available (111 aa)
Use1Unconventional SNARE in the ER 1 homolog (S. cerevisiae). (284 aa)
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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