STRINGSTRING
Rpe Rpe Pgd Pgd H6pd H6pd Rpia Rpia Taldo1 Taldo1 Tktl2 Tktl2 Tktl1 Tktl1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RpeRibulose-5-phosphate-3-epimerase. (235 aa)
PgdPhosphogluconate dehydrogenase. (483 aa)
H6pdHexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase). (797 aa)
RpiaRibose 5-phosphate isomerase A. (303 aa)
Taldo1Transaldolase 1. (337 aa)
Tktl2Transketolase-like 2. (627 aa)
Tktl1Transketolase-like 1. (595 aa)
Your Current Organism:
Mus spretus
NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse
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