(31 nodes) Golgi to plasma membrane protein transport network (Mus spretus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Rab26	RAB26, member RAS oncogene family. (296 aa)
	Gga3	Golgi associated, gamma adaptin ear containing, ARF binding protein 3. (718 aa)
	Golga4	Golgi autoantigen, golgin subfamily a, 4. (2239 aa)
	D230025D16Rik	RIKEN cDNA D230025D16 gene. (422 aa)
	Bbs2	Bardet-Biedl syndrome 2 (human). (721 aa)
	Golga7	Golgi autoantigen, golgin subfamily a, 7. (137 aa)
	Gga2	Golgi associated, gamma adaptin ear containing, ARF binding protein 2. (603 aa)
	Vamp5	Vesicle-associated membrane protein 5. (102 aa)
	Vamp3	Vesicle-associated membrane protein 3. (103 aa)
	Macf1	Microtubule-actin crosslinking factor 1. (7355 aa)
	Golph3l	Golgi phosphoprotein 3-like. (343 aa)
	Arfrp1	ADP-ribosylation factor related protein 1. (201 aa)
	Sys1	SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae). (156 aa)
	Sec16a	SEC16 homolog A, endoplasmic reticulum export factor. (2377 aa)
	Optn	Optineurin. (583 aa)
	Bbs1	Bardet-Biedl syndrome 1 (human). (593 aa)
	Prepl	Prolyl endopeptidase-like. (725 aa)
	Rab31	RAB31, member RAS oncogene family. (195 aa)
	Vamp4	Vesicle-associated membrane protein 4. (119 aa)
	Blzf1	Basic leucine zipper nuclear factor 1. (410 aa)
	MGP_SPRETEiJ_P0024436	annotation not available (2870 aa)
	Sptbn1	Spectrin beta, non-erythrocytic 1. (2363 aa)
	MGP_SPRETEiJ_P0028857	annotation not available (163 aa)
	Rab34	RAB34, member RAS oncogene family. (265 aa)
	Nsf	N-ethylmaleimide sensitive fusion protein. (744 aa)
	Rab10	RAB10, member RAS oncogene family. (200 aa)
	Amn	Amnionless. (458 aa)
	Kif13a	Kinesin family member 13A. (1749 aa)
	Golph3	Golgi phosphoprotein 3. (298 aa)
	Gga1	Golgi associated, gamma adaptin ear containing, ARF binding protein 1. (635 aa)
	Krt18	Keratin 18. (423 aa)

Your Current Organism:

Mus spretus

NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Arfrp1	Golga4	MGP_SPRETEiJ_P0058956	MGP_SPRETEiJ_P0094248	ADP-ribosylation factor related protein 1.	Golgi autoantigen, golgin subfamily a, 4.	0.470
Arfrp1	Nsf	MGP_SPRETEiJ_P0058956	MGP_SPRETEiJ_P0031853	ADP-ribosylation factor related protein 1.	N-ethylmaleimide sensitive fusion protein.	0.643
Arfrp1	Rab34	MGP_SPRETEiJ_P0058956	MGP_SPRETEiJ_P0029926	ADP-ribosylation factor related protein 1.	RAB34, member RAS oncogene family.	0.667
Arfrp1	Sys1	MGP_SPRETEiJ_P0058956	MGP_SPRETEiJ_P0058205	ADP-ribosylation factor related protein 1.	SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae).	0.867
Arfrp1	Vamp4	MGP_SPRETEiJ_P0058956	MGP_SPRETEiJ_P0021840	ADP-ribosylation factor related protein 1.	Vesicle-associated membrane protein 4.	0.617
Bbs1	Bbs2	MGP_SPRETEiJ_P0049510	MGP_SPRETEiJ_P0089075	Bardet-Biedl syndrome 1 (human).	Bardet-Biedl syndrome 2 (human).	0.999
Bbs2	Bbs1	MGP_SPRETEiJ_P0089075	MGP_SPRETEiJ_P0049510	Bardet-Biedl syndrome 2 (human).	Bardet-Biedl syndrome 1 (human).	0.999
Gga1	Gga2	MGP_SPRETEiJ_P0040670	MGP_SPRETEiJ_P0085327	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	0.958
Gga1	Gga3	MGP_SPRETEiJ_P0040670	MGP_SPRETEiJ_P0032398	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	Golgi associated, gamma adaptin ear containing, ARF binding protein 3.	0.948
Gga1	Rab31	MGP_SPRETEiJ_P0040670	MGP_SPRETEiJ_P0047355	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	RAB31, member RAS oncogene family.	0.463
Gga2	Gga1	MGP_SPRETEiJ_P0085327	MGP_SPRETEiJ_P0040670	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	0.958
Gga2	Gga3	MGP_SPRETEiJ_P0085327	MGP_SPRETEiJ_P0032398	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	Golgi associated, gamma adaptin ear containing, ARF binding protein 3.	0.941
Gga3	Gga1	MGP_SPRETEiJ_P0032398	MGP_SPRETEiJ_P0040670	Golgi associated, gamma adaptin ear containing, ARF binding protein 3.	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	0.948
Gga3	Gga2	MGP_SPRETEiJ_P0032398	MGP_SPRETEiJ_P0085327	Golgi associated, gamma adaptin ear containing, ARF binding protein 3.	Golgi associated, gamma adaptin ear containing, ARF binding protein 2.	0.941
Golga4	Arfrp1	MGP_SPRETEiJ_P0094248	MGP_SPRETEiJ_P0058956	Golgi autoantigen, golgin subfamily a, 4.	ADP-ribosylation factor related protein 1.	0.470
MGP_SPRETEiJ_P0024436	Sptbn1	MGP_SPRETEiJ_P0024436	MGP_SPRETEiJ_P0027357	annotation not available	Spectrin beta, non-erythrocytic 1.	0.997
MGP_SPRETEiJ_P0028857	Nsf	MGP_SPRETEiJ_P0028857	MGP_SPRETEiJ_P0031853	annotation not available	N-ethylmaleimide sensitive fusion protein.	0.933
MGP_SPRETEiJ_P0028857	Vamp3	MGP_SPRETEiJ_P0028857	MGP_SPRETEiJ_P0068559	annotation not available	Vesicle-associated membrane protein 3.	0.992
MGP_SPRETEiJ_P0028857	Vamp4	MGP_SPRETEiJ_P0028857	MGP_SPRETEiJ_P0021840	annotation not available	Vesicle-associated membrane protein 4.	0.983
Macf1	Sptbn1	MGP_SPRETEiJ_P0066754	MGP_SPRETEiJ_P0027357	Microtubule-actin crosslinking factor 1.	Spectrin beta, non-erythrocytic 1.	0.418