(62 nodes) Vesicle docking network (Mus spretus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Cep83	Centrosomal protein 83. (692 aa)
	MGP_SPRETEiJ_P0017897	annotation not available (804 aa)
	Stx6	Syntaxin 6. (255 aa)
	Stx11	Syntaxin 11. (287 aa)
	Bves	Blood vessel epicardial substance. (358 aa)
	Syde1	Synapse defective 1, Rho GTPase, homolog 1 (C. elegans). (737 aa)
	MGP_SPRETEiJ_P0096284	annotation not available (296 aa)
	Unc13c	Unc-13 homolog C. (2210 aa)
	Rab8b	RAB8B, member RAS oncogene family. (207 aa)
	Vps11	VPS11, CORVET/HOPS core subunit. (941 aa)
	Rab3d	RAB3D, member RAS oncogene family. (219 aa)
	Exoc8	Exocyst complex component 8. (716 aa)
	MGP_SPRETEiJ_P0089177	annotation not available (444 aa)
	Rab8a	RAB8A, member RAS oncogene family. (207 aa)
	Unc13a	Unc-13 homolog A. (1731 aa)
	Rab3a	RAB3A, member RAS oncogene family. (220 aa)
	Stxbp2	Syntaxin binding protein 2. (593 aa)
	Ctbp2	C-terminal binding protein 2. (988 aa)
	Stx4a	Syntaxin 4A (placental). (298 aa)
	Stx1b	Syntaxin 1B. (288 aa)
	Cln3	Ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease). (438 aa)
	Sytl2	Synaptotagmin-like 2. (950 aa)
	Ppfia3	annotation not available (1194 aa)
	Exoc6b	Exocyst complex component 6B. (810 aa)
	Exoc4	Exocyst complex component 4. (975 aa)
	Cftr	Cystic fibrosis transmembrane conductance regulator. (1445 aa)
	Cav2	Caveolin 2. (162 aa)
	Stx1a	Syntaxin 1A (brain). (288 aa)
	Stx2	Syntaxin 2. (289 aa)
	Uso1	USO1 vesicle docking factor. (959 aa)
	Exoc1	Exocyst complex component 1. (901 aa)
	Scfd2	Sec1 family domain containing 2. (684 aa)
	Stx12	Syntaxin 12. (274 aa)
	Rab3b	RAB3B, member RAS oncogene family. (228 aa)
	Stx17	Syntaxin 17. (301 aa)
	Unc13b	Unc-13 homolog B. (1609 aa)
	Stxbp3	Syntaxin binding protein 3. (592 aa)
	Stx16	Syntaxin 16. (327 aa)
	Kcnb1	Potassium voltage gated channel, Shab-related subfamily, member 1. (857 aa)
	Bloc1s6	Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin. (172 aa)
	Vps18	VPS18 CORVET/HOPS core subunit. (973 aa)
	Rabepk	Rab9 effector protein with kelch motifs. (380 aa)
	Stxbp1	Syntaxin binding protein 1. (603 aa)
	Exoc6	Exocyst complex component 6. (804 aa)
	Stx3	Syntaxin 3. (289 aa)
	MGP_SPRETEiJ_P0049970	annotation not available (440 aa)
	Rab12	RAB12, member RAS oncogene family. (292 aa)
	Stx19	Syntaxin 19. (292 aa)
	Rims2	Regulating synaptic membrane exocytosis 2. (1572 aa)
	Exoc5	Exocyst complex component 5. (708 aa)
	Rab3c	RAB3C, member RAS oncogene family. (227 aa)
	Exoc3	Exocyst complex component 3. (755 aa)
	Cplx2	Complexin 2. (134 aa)
	Exoc2	Exocyst complex component 2. (924 aa)
	Rab15	RAB15, member RAS oncogene family. (212 aa)
	Rab10	RAB10, member RAS oncogene family. (200 aa)
	Exoc7	Exocyst complex component 7. (697 aa)
	MGP_SPRETEiJ_P0028857	annotation not available (163 aa)
	Stx8	Syntaxin 8. (236 aa)
	Plek	Pleckstrin. (350 aa)
	Ykt6	YKT6 v-SNARE homolog (S. cerevisiae). (198 aa)
	Syt1	Synaptotagmin I. (421 aa)

Your Current Organism:

Mus spretus

NCBI taxonomy Id: 10096
Other names: Algerian mouse, M. spretus, Mus musculus spretus, western wild mouse

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Bloc1s6	MGP_SPRETEiJ_P0028857	MGP_SPRETEiJ_P0056367	MGP_SPRETEiJ_P0028857	Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin.	annotation not available	0.881
Bloc1s6	Stx11	MGP_SPRETEiJ_P0056367	MGP_SPRETEiJ_P0023389	Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin.	Syntaxin 11.	0.447
Bloc1s6	Stx12	MGP_SPRETEiJ_P0056367	MGP_SPRETEiJ_P0067424	Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin.	Syntaxin 12.	0.979
Bloc1s6	Stx17	MGP_SPRETEiJ_P0056367	MGP_SPRETEiJ_P0064783	Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin.	Syntaxin 17.	0.909
Bloc1s6	Stx6	MGP_SPRETEiJ_P0056367	MGP_SPRETEiJ_P0021525	Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin.	Syntaxin 6.	0.884
Bloc1s6	Stx8	MGP_SPRETEiJ_P0056367	MGP_SPRETEiJ_P0028754	Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin.	Syntaxin 8.	0.788
Cep83	MGP_SPRETEiJ_P0049970	MGP_SPRETEiJ_P0025812	MGP_SPRETEiJ_P0049970	Centrosomal protein 83.	annotation not available	0.665
Cep83	Rab10	MGP_SPRETEiJ_P0025812	MGP_SPRETEiJ_P0033231	Centrosomal protein 83.	RAB10, member RAS oncogene family.	0.410
Cep83	Rab15	MGP_SPRETEiJ_P0025812	MGP_SPRETEiJ_P0034121	Centrosomal protein 83.	RAB15, member RAS oncogene family.	0.410
Cep83	Rab8a	MGP_SPRETEiJ_P0025812	MGP_SPRETEiJ_P0088497	Centrosomal protein 83.	RAB8A, member RAS oncogene family.	0.634
Cep83	Rab8b	MGP_SPRETEiJ_P0025812	MGP_SPRETEiJ_P0092071	Centrosomal protein 83.	RAB8B, member RAS oncogene family.	0.410
Cep83	Uso1	MGP_SPRETEiJ_P0025812	MGP_SPRETEiJ_P0071750	Centrosomal protein 83.	USO1 vesicle docking factor.	0.663
Cftr	MGP_SPRETEiJ_P0028857	MGP_SPRETEiJ_P0075570	MGP_SPRETEiJ_P0028857	Cystic fibrosis transmembrane conductance regulator.	annotation not available	0.557
Cftr	Syt1	MGP_SPRETEiJ_P0075570	MGP_SPRETEiJ_P0025939	Cystic fibrosis transmembrane conductance regulator.	Synaptotagmin I.	0.562
Cplx2	MGP_SPRETEiJ_P0017897	MGP_SPRETEiJ_P0036024	MGP_SPRETEiJ_P0017897	Complexin 2.	annotation not available	0.640
Cplx2	MGP_SPRETEiJ_P0028857	MGP_SPRETEiJ_P0036024	MGP_SPRETEiJ_P0028857	Complexin 2.	annotation not available	0.955
Cplx2	MGP_SPRETEiJ_P0096284	MGP_SPRETEiJ_P0036024	MGP_SPRETEiJ_P0096284	Complexin 2.	annotation not available	0.614
Cplx2	Rab3a	MGP_SPRETEiJ_P0036024	MGP_SPRETEiJ_P0088336	Complexin 2.	RAB3A, member RAS oncogene family.	0.596
Cplx2	Rab3b	MGP_SPRETEiJ_P0036024	MGP_SPRETEiJ_P0066007	Complexin 2.	RAB3B, member RAS oncogene family.	0.596
Cplx2	Rab3c	MGP_SPRETEiJ_P0036024	MGP_SPRETEiJ_P0037134	Complexin 2.	RAB3C, member RAS oncogene family.	0.596