STRINGSTRING
Me1 Me1 Triobp Triobp Ppp1r3a Ppp1r3a Wnt2 Wnt2 A0A0G2JZE1_RAT A0A0G2JZE1_RAT Sirt1 Sirt1 Scamp1 Scamp1 Bbx Bbx Ttc39c Ttc39c Mbp Mbp LOC100911216 LOC100911216 Rtraf Rtraf Prl3c1 Prl3c1 Amer2 Amer2 Pxdn Pxdn Fcsk Fcsk Tubgcp3 Tubgcp3 Zfp185 Zfp185 Mgat1 Mgat1 Mup5 Mup5 Serf1 Serf1 Cox11 Cox11 Vrtn Vrtn Cfl2 Cfl2 LOC298111 LOC298111 Kdr Kdr Gpx1 Gpx1 LOC100359924 LOC100359924 LOC100911238 LOC100911238 Fosb Fosb Pou5f1 Pou5f1 Arl14 Arl14 M0R6D6_RAT M0R6D6_RAT Gtpbp4 Gtpbp4 Bdnf Bdnf Ugp2 Ugp2 Nanog Nanog Tm9sf4 Tm9sf4 Tmprss2 Tmprss2 Spp1 Spp1 Gpsm2 Gpsm2 Znf442-2 Znf442-2 Fis1 Fis1 Cacna1f Cacna1f Prl3d2 Prl3d2 Fhdc1 Fhdc1 Wfdc11 Wfdc11 Rpgr Rpgr Cant1 Cant1 LOC100911734 LOC100911734 Cfl1 Cfl1 Xpa Xpa Det1 Det1 Prcd Prcd Pvalb Pvalb Virma Virma Dmp1 Dmp1 Runx2 Runx2 Rapgef1 Rapgef1 Nfasc Nfasc Dda1 Dda1 Prss29 Prss29 Zfp787 Zfp787 Pjvk Pjvk Disc1 Disc1 Chp1 Chp1 Ehd1 Ehd1 LOC100911204 LOC100911204 ATP6 ATP6 Prl3d1 Prl3d1 Mup4 Mup4 Ace2 Ace2 Lgals4 Lgals4 Recql4 Recql4 Acr Acr Gsc2 Gsc2 F1LXA1_RAT F1LXA1_RAT F7ETL6_RAT F7ETL6_RAT Mapt Mapt Gapdh Gapdh Wfdc9 Wfdc9 LOC360933 LOC360933 Espn Espn Zfp951 Zfp951 Otol1 Otol1 Akt1 Akt1 Esf1 Esf1 Il17rc Il17rc Tril Tril Sall3 Sall3 Muc5b Muc5b RGD1559662 RGD1559662 Pmf1 Pmf1 Nexmif Nexmif Rcor2l1 Rcor2l1 Aldh5a1 Aldh5a1 Kif24 Kif24 Ccdc18 Ccdc18 Hfm1 Hfm1 Ttn Ttn Sox17 Sox17 Dagla Dagla Rmi2 Rmi2 Fam126b Fam126b Prdm14 Prdm14 Lax1 Lax1 Drap1 Drap1 Polr2b Polr2b Arsk Arsk Uchl3-ps1 Uchl3-ps1 Tac4 Tac4 Ago4 Ago4 Bmp2 Bmp2 Spef1 Spef1 Rbm8a Rbm8a Nudt22 Nudt22 Psmb4 Psmb4 Ucn2 Ucn2 Mus81 Mus81 Th Th Med25 Med25 Ins2 Ins2 Cntnap1 Cntnap1 Med29 Med29 Trpv3 Trpv3 Bglap Bglap Trpv1 Trpv1 Dlk2 Dlk2 Ampd1 Ampd1 Agt Agt Sidt2 Sidt2 Etfb Etfb Pnlip Pnlip Plvap Plvap C1ql3 C1ql3 Otoa Otoa Zfp335 Zfp335 Me3 Me3 Csprs Csprs Calb2 Calb2 Dolk Dolk Lbx1 Lbx1 Lsm1 Lsm1 Alg10 Alg10 Cib3 Cib3 Txndc17 Txndc17 Edn1 Edn1 Pth Pth Hmox1 Hmox1 Prickle4 Prickle4 Elof1 Elof1 Dll4 Dll4 Sp7 Sp7 C1qtnf9 C1qtnf9 Snrnp48 Snrnp48 Defa5 Defa5 Bpifb6 Bpifb6 Rbl2 Rbl2 Ptk6 Ptk6 Nup58 Nup58 Tsc1 Tsc1 Khdrbs2 Khdrbs2 Pkia Pkia Sox2 Sox2 Tsc2 Tsc2 Mapre1 Mapre1 Ins1 Ins1 Tbl1xr1 Tbl1xr1 Furin Furin Stard5 Stard5 Atp13a1 Atp13a1 Pcsk1 Pcsk1 Spin1 Spin1 Tmem203 Tmem203 Msh4 Msh4 Casp3 Casp3 Mpp4 Mpp4 Esrrb Esrrb Prickle3 Prickle3 Il6 Il6 Chmp4c Chmp4c Gale Gale Exoc7 Exoc7 LOC103689974 LOC103689974 Dtd1 Dtd1 Serpina6 Serpina6 Erg28 Erg28 Nans Nans Ssrp1 Ssrp1 Csrp1 Csrp1 Miox Miox Ets1 Ets1 Alk Alk Oser1 Oser1 Ddx47 Ddx47 Gjd2 Gjd2 Fos Fos Ehd4 Ehd4 Tac1 Tac1 Meox2 Meox2 Cspp1 Cspp1 Abi3 Abi3 Nlrc4 Nlrc4 Art4 Art4 Ppp3r2 Ppp3r2 Ubxn2a Ubxn2a Cstl1 Cstl1 Cela1 Cela1 Il1b Il1b Il10 Il10 Sec14l3 Sec14l3 Dlx4 Dlx4 Thap2 Thap2 Nphs2 Nphs2 Snrk Snrk Cd55 Cd55 Nup85 Nup85 Hmox2 Hmox2 Tlr5 Tlr5 Elac2 Elac2 C1ql1 C1ql1 Akap4 Akap4 Alb Alb Afp Afp Eef2kmt Eef2kmt Rtl3 Rtl3 Hlx Hlx Barhl2 Barhl2 Sidt1 Sidt1 Vcsa2 Vcsa2 Tprg1 Tprg1 Opa1 Opa1 Ripk4 Ripk4 N6amt1 N6amt1 Tecpr1 Tecpr1 LOC103694380 LOC103694380 Jmjd1c Jmjd1c B3galt4 B3galt4 Thoc3 Thoc3 Muc5ac Muc5ac Ago1 Ago1 Dsg3 Dsg3 Tspan1 Tspan1 Ngf Ngf Pik3ca Pik3ca Ccdc83 Ccdc83 Actb Actb Rcor2 Rcor2 Smr3b Smr3b Insrr Insrr Me2 Me2 LOC685590 LOC685590 Noa1 Noa1 Gata5 Gata5 Dnajc22 Dnajc22 Amy2a3 Amy2a3 Spdya Spdya A0A0G2K8X5_RAT A0A0G2K8X5_RAT Ranbp6 Ranbp6 Lsg1 Lsg1 Myo1e Myo1e Sfrp4 Sfrp4 Grk3 Grk3 Spo11 Spo11 A0A0G2KA35_RAT A0A0G2KA35_RAT Sde2 Sde2 Dsc1 Dsc1 Knl1 Knl1 Ptpdc1 Ptpdc1 Nup62cl Nup62cl Pou5f2 Pou5f2 Zfp951-2 Zfp951-2 Plekhg2 Plekhg2
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Me1NADP-dependent malic enzyme; Belongs to the malic enzymes family. (571 aa)
TriobpTRIO and F-actin-binding protein. (2017 aa)
Ppp1r3aSimilar to type 1 protein phosphatase targeting subunit RGL/GM (Predicted). (1096 aa)
Wnt2Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (360 aa)
A0A0G2JZE1_RATDeath domain-containing protein. (337 aa)
Sirt1NAD-dependent protein deacetylase sirtuin-1; NAD-dependent protein deacetylase that links transcriptional regulation directly to intracellular energetics and participates in the coordination of several separated cellular functions such as cell cycle, response to DNA damage, metabolism, apoptosis and autophagy. Can modulate chromatin function through deacetylation of histones and can promote alterations in the methylation of histones and DNA, leading to transcriptional repression. Deacetylates a broad range of transcription factors and coregulators, thereby regulating target gene expres [...] (730 aa)
Scamp1Secretory carrier-associated membrane protein 1; Functions in post-Golgi recycling pathways. Acts as a recycling carrier to the cell surface. (321 aa)
BbxBBX high mobility group box domain-containing. (938 aa)
Ttc39cTetratricopeptide repeat protein 39C; Belongs to the TTC39 family. (545 aa)
MbpMyelin basic protein; Is, with PLP, the most abundant protein component of the myelin membrane in the CNS. Has a role in both the formation and stabilization of this compact multilayer arrangement of bilayers. Each splice variant and charge isomer may have a specialized function in the assembly of an optimized, biochemically functional myelin membrane (By similarity). (197 aa)
LOC100911216Neuroendocrine convertase 1-like. (628 aa)
RtrafRNA transcription, translation and transport factor. (296 aa)
Prl3c1Prolactin-3C1. (211 aa)
Amer2APC membrane recruitment protein 2. (509 aa)
PxdnPeroxidasin. (1475 aa)
FcskFucose kinase. (1090 aa)
Tubgcp3Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. (902 aa)
Zfp185Zinc finger protein 185. (483 aa)
Mgat1Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase; Initiates complex N-linked carbohydrate formation. Essential for the conversion of high-mannose to hybrid and complex N-glycans. (447 aa)
Mup5Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (181 aa)
Serf1Similar to small EDRK-rich factor 1 (Predicted), isoform CRA_a. (62 aa)
Cox11Cytochrome c oxidase copper chaperone COX11. (275 aa)
VrtnVertebrae development-associated. (742 aa)
Cfl2Cofilin 2, muscle (Predicted), isoform CRA_b; Belongs to the actin-binding proteins ADF family. (166 aa)
LOC298111Alpha2u globulin; Belongs to the calycin superfamily. Lipocalin family. (181 aa)
KdrVascular endothelial growth factor receptor 2; Tyrosine-protein kinase that acts as a cell-surface receptor for VEGFA, VEGFC and VEGFD. Plays an essential role in the regulation of angiogenesis, vascular development, vascular permeability, and embryonic hematopoiesis. Promotes proliferation, survival, migration and differentiation of endothelial cells. Promotes reorganization of the actin cytoskeleton. Isoforms lacking a transmembrane domain may function as decoy receptors for VEGFA, VEGFC and/or VEGFD. Modulates FLT1 and FLT4 signaling by forming heterodimers. Binding of vascular grow [...] (1343 aa)
Gpx1Glutathione peroxidase 1; Protects the hemoglobin in erythrocytes from oxidative breakdown; Belongs to the glutathione peroxidase family. (200 aa)
LOC100359924Prostate and testis-expressed N-like. (119 aa)
LOC100911238Similar to chromosome 13 open reading frame 12 (Predicted). (141 aa)
FosbFosB proto-oncogene, AP-1 transcription factor subunit. (338 aa)
Pou5f1POU domain protein. (352 aa)
Arl14ADP-ribosylation factor-like GTPase 14; Belongs to the small GTPase superfamily. Arf family. (192 aa)
M0R6D6_RATADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (159 aa)
Gtpbp4Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (636 aa)
BdnfBrain-derived neurotrophic factor; Important signaling molecule that activates signaling cascades downstream of NTRK2 (By similarity). During development, promotes the survival and differentiation of selected neuronal populations of the peripheral and central nervous systems. Participates in axonal growth, pathfinding and in the modulation of dendritic growth and morphology. Major regulator of synaptic transmission and plasticity at adult synapses in many regions of the CNS. The versatility of BDNF is emphasized by its contribution to a range of adaptive neuronal responses including lo [...] (362 aa)
Ugp2UTP--glucose-1-phosphate uridylyltransferase. (508 aa)
NanogNanog homeobox. (312 aa)
Tm9sf4Transmembrane 9 superfamily member 4; Associates with proteins harboring glycine-rich transmembrane domains and ensures their efficient localization to the cell surface. Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (643 aa)
Tmprss2Transmembrane protease, serine 2, isoform CRA_c; Belongs to the peptidase S1 family. (490 aa)
Spp1Osteopontin; Binds tightly to hydroxyapatite. Appears to form an integral part of the mineralized matrix. Probably important to cell-matrix interaction; Belongs to the osteopontin family. (317 aa)
Gpsm2G-protein-signaling modulator 2. (678 aa)
Znf442-2Zinc finger protein 442. (336 aa)
Fis1Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering. Plays a minor role in the recruitment and association of the fission mediator dynamin-related protein 1 (DNM1L) to the mitochondrial surface and mitochondrial fission. Can induce cytochrome c release from the mitochondrion to the cytosol, ultimately leading to apoptosis. Also mediates peroxisomal fission (By similarity); Belongs to the FIS1 family. (179 aa)
Cacna1fVoltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family. (1980 aa)
Prl3d2Prolactin family 3, subfamily d, member 2. (230 aa)
Fhdc1Similar to CG32384-PA (Predicted). (1148 aa)
Wfdc11WAP four-disulfide core domain protein 11. (84 aa)
RpgrRetinitis pigmentosa GTPase regulator. (677 aa)
Cant1Soluble calcium-activated nucleotidase 1; Calcium-dependent nucleotidase with a preference for UDP. The order of activity with different substrates is UDP > GDP > IDP >> UTP > CDP = GTP = ITP. Has very low activity towards ADP and even lower activity towards ATP. Does not hydrolyze AMP and GMP. Involved in proteoglycan synthesis (By similarity). (403 aa)
LOC100911734Exocyst complex component 7-like. (653 aa)
Cfl1Cofilin-1; Binds to F-actin and exhibits pH-sensitive F-actin depolymerizing activity. Regulates actin cytoskeleton dynamics. Important for normal progress through mitosis and normal cytokinesis. Plays a role in the regulation of cell morphology and cytoskeletal organization. Required for the up-regulation of atypical chemokine receptor ACKR2 from endosomal compartment to cell membrane, increasing its efficiency in chemokine uptake and degradation. Required for neural tube morphogenesis and neural crest cell migration (By similarity). (166 aa)
XpaXeroderma pigmentosum, complementation group A (Predicted), isoform CRA_a. (241 aa)
Det1DET1 partner of COP1 E3 ubiquitin ligase. (550 aa)
PrcdUncharacterized protein. (47 aa)
PvalbParvalbumin alpha; In muscle, parvalbumin is thought to be involved in relaxation after contraction. It binds two calcium ions; Belongs to the parvalbumin family. (110 aa)
VirmaVir-like m6A methyltransferase-associated. (1811 aa)
Dmp1Dentin matrix acidic phosphoprotein 1; May have a dual function during osteoblast differentiation. In the nucleus of undifferentiated osteoblasts, unphosphorylated form acts as a transcriptional component for activation of osteoblast- specific genes like osteocalcin. During the osteoblast to osteocyte transition phase it is phosphorylated and exported into the extracellular matrix, where it regulates nucleation of hydroxyapatite (By similarity). (489 aa)
Runx2Runt-related transcription factor 2; Transcription factor involved in osteoblastic differentiation and skeletal morphogenesis. Essential for the maturation of osteoblasts and both intramembranous and endochondral ossification. CBF binds to the core site, 5'-PYGPYGGT-3', of a number of enhancers and promoters, including murine leukemia virus, polyomavirus enhancer, T-cell receptor enhancers, osteocalcin, osteopontin, bone sialoprotein, alpha 1(I) collagen, LCK, IL-3 and GM-CSF promoters. Inhibits KAT6B-dependent transcriptional activation. In osteoblasts, supports transcription activati [...] (529 aa)
Rapgef1Rap guanine nucleotide exchange factor 1. (1253 aa)
NfascNeurofascin; Cell adhesion, ankyrin-binding protein which may be involved in neurite extension, axonal guidance, synaptogenesis, myelination and neuron-glial cell interactions. Isoform 2/isoform 3 may be responsible for mediating and signaling axon-glial interaction during the early stages of myelination; Belongs to the immunoglobulin superfamily. L1/neurofascin/NgCAM family. (1240 aa)
Dda1DET1 and DDB1-associated 1. (101 aa)
Prss29Protease, serine, 29; Belongs to the peptidase S1 family. (279 aa)
Zfp787Zinc finger protein 787. (381 aa)
PjvkPejvakin. (351 aa)
Disc1Disrupted in schizophrenia 1 homolog; Involved in the regulation of multiple aspects of embryonic and adult neurogenesis. Required for neural progenitor proliferation in the ventrical/subventrical zone during embryonic brain development and in the adult dentate gyrus of the hippocampus. Participates in the Wnt- mediated neural progenitor proliferation as a positive regulator by modulating GSK3B activity and CTNNB1 abundance. Plays a role as a modulator of the AKT-mTOR signaling pathway controlling the tempo of the process of newborn neurons integration during adult neurogenesis, includ [...] (846 aa)
Chp1Calcineurin B homologous protein 1; Calcium-binding protein involved in different processes such as regulation of vesicular trafficking, plasma membrane Na(+)/H(+) exchanger and gene transcription. Involved in the constitutive exocytic membrane traffic. Mediates the association between microtubules and membrane-bound organelles of the endoplasmic reticulum and Golgi apparatus and is also required for the targeting and fusion of transcytotic vesicles (TCV) with the plasma membrane. Functions as an integral cofactor in cell pH regulation by controlling plasma membrane- type Na(+)/H(+) ex [...] (195 aa)
Ehd1EH domain-containing protein 1; ATP- and membrane-binding protein that controls membrane reorganization/tubulation upon ATP hydrolysis. In vitro causes vesiculation of endocytic membranes (By similarity). Acts in early endocytic membrane fusion and membrane trafficking of recycling endosomes (By similarity). Recruited to endosomal membranes upon nerve growth factor stimulation, indirectly regulates neurite outgrowth. Plays a role in myoblast fusion (By similarity). Involved in the unidirectional retrograde dendritic transport of endocytosed BACE1 and in efficient sorting of BACE1 to ax [...] (534 aa)
LOC100911204Protein CASC5-like. (1631 aa)
ATP6ATP synthase subunit a; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subuni [...] (226 aa)
Prl3d1Prolactin-3D1; Belongs to the somatotropin/prolactin family. (228 aa)
Mup4Major urinary protein 4; Belongs to the calycin superfamily. Lipocalin family. (181 aa)
Ace2Processed angiotensin-converting enzyme 2; Carboxypeptidase which converts angiotensin I to angiotensin 1-9, a peptide of unknown function, and angiotensin II to angiotensin 1-7, a vasodilator (By similarity). Also able to hydrolyze apelin-13 and dynorphin-13 with high efficiency. By cleavage of angiotensin II, may be an important regulator of heart function (By similarity). By cleavage of angiotensin II, may also have a protective role in acute lung injury (By similarity). Plays an important role in amino acid transport by acting as binding partner of amino acid transporter SLC6A19 in [...] (766 aa)
Lgals4Galectin-4; Galectin that binds lactose and a related range of sugars. (324 aa)
Recql4RecQ-like helicase 4. (1216 aa)
AcrAcrosin heavy chain; Acrosin is the major protease of mammalian spermatozoa. It is a serine protease of trypsin-like cleavage specificity, it is synthesized in a zymogen form, proacrosin and stored in the acrosome; Belongs to the peptidase S1 family. (437 aa)
Gsc2Goosecoid-like (Predicted). (214 aa)
F1LXA1_RATUncharacterized protein. (186 aa)
F7ETL6_RATUncharacterized protein. (428 aa)
MaptMicrotubule-associated protein tau; Promotes microtubule assembly and stability, and might be involved in the establishment and maintenance of neuronal polarity. The C-terminus binds axonal microtubules while the N-terminus binds neural plasma membrane components, suggesting that tau functions as a linker protein between both. Axonal polarity is predetermined by tau localization (in the neuronal cell) in the domain of the cell body defined by the centrosome. The short isoforms allow plasticity of the cytoskeleton whereas the longer isoforms may preferentially play a role in its stabili [...] (686 aa)
GapdhGlyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Facilitates the CHP1-dependent microtubule and membrane associations through its ability to stimulate the binding of CHP1 to microtubu [...] (333 aa)
Wfdc9Protein WFDC9. (74 aa)
LOC360933Similar to Ac1591. (333 aa)
EspnEspin; Multifunctional actin-bundling protein. Plays a major role in regulating the organization, dimension, dynamics and signaling capacities of the actin filament-rich microvilli in the mechanosensory and chemosensory cells. Required for the assembly and stabilization of the stereociliary parallel actin bundles. Plays a crucial role in the formation and maintenance of inner ear hair cell stereocilia. Involved in the elongation of actin in stereocilia. In extrastriolar hair cells, required for targeting MYO3B to stereocilia tips, and for regulation of stereocilia diameter and staircas [...] (838 aa)
Zfp951Zinc finger protein 120-like. (409 aa)
Otol1Otolin 1. (482 aa)
Akt1RAC-alpha serine/threonine-protein kinase; AKT1 is one of 3 closely related serine/threonine-protein kinases (AKT1, AKT2 and AKT3) called the AKT kinase, and which regulate many processes including metabolism, proliferation, cell survival, growth and angiogenesis. This is mediated through serine and/or threonine phosphorylation of a range of downstream substrates. Over 100 substrate candidates have been reported so far, but for most of them, no isoform specificity has been reported. AKT is responsible of the regulation of glucose uptake by mediating insulin-induced translocation of the [...] (480 aa)
Esf1ESF1 homolog; May constitute a novel regulatory system for basal transcription. Negatively regulates ABT1; Belongs to the ESF1 family. (842 aa)
Il17rcInterleukin 17 receptor C. (677 aa)
TrilTLR4 interactor with leucine rich repeats; Component of the TLR4 signaling complex. Mediates the innate immune response to bacterial lipopolysaccharide (LPS) leading to cytokine secretion and the inflammatory response (By similarity). (811 aa)
Sall3Sal-like 3 (Drosophila) (Predicted). (1190 aa)
Muc5bMucin 5B, oligomeric mucus/gel-forming. (4156 aa)
RGD1559662Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (242 aa)
Pmf1Polyamine-modulated factor 1. (202 aa)
NexmifNeurite extension and migration factor; Involved in neurite outgrowth by regulating cell-cell adhesion via the N-cadherin signaling pathway. May act by regulating expression of protein-coding genes, such as N-cadherins and integrin beta-1 (ITGB1). (1517 aa)
Rcor2l1REST corepressor 2; May act as a component of a corepressor complex that represses transcription; Belongs to the CoREST family. (523 aa)
Aldh5a1Succinate-semialdehyde dehydrogenase, mitochondrial; Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA); Belongs to the aldehyde dehydrogenase family. (523 aa)
Kif24Similar to CG1453-PA (Predicted), isoform CRA_a; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1368 aa)
Ccdc18Coiled-coil domain-containing 18. (1384 aa)
Hfm1Helicase for meiosis 1. (1434 aa)
TtnUncharacterized protein. (655 aa)
Sox17SRY-box containing gene 17 (Predicted), isoform CRA_a. (423 aa)
DaglaSn1-specific diacylglycerol lipase alpha; Catalyzes the hydrolysis of diacylglycerol (DAG) to 2- arachidonoyl-glycerol (2-AG), the most abundant endocannabinoid in tissues. Required for axonal growth during development and for retrograde synaptic signaling at mature synapses (By similarity). (1044 aa)
Rmi2RecQ mediated genome instability 2. (149 aa)
Fam126bFamily with sequence similarity 126, member B. (456 aa)
Prdm14PR/SET domain 14. (559 aa)
Lax1Lymphocyte transmembrane adapter 1; Negatively regulates TCR (T-cell antigen receptor)-mediated signaling in T-cells and BCR (B-cell antigen receptor)-mediated signaling in B-cells. (406 aa)
Drap1Dr1-associated corepressor; The association of the DR1/DRAP1 heterodimer with TBP results in a functional repression of both activated and basal transcription of class II genes. This interaction precludes the formation of a transcription-competent complex by inhibiting the association of TFIIA and/or TFIIB with TBP. Can bind to DNA on its own (By similarity). Belongs to the NC2 alpha/DRAP1 family. (205 aa)
Polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
ArskArylsulfatase K. (563 aa)
Uchl3-ps1Ubiquitin C-terminal hydrolase L3. (230 aa)
Tac4Tachykinin-4; Tachykinins are active peptides which excite neurons, evoke behavioral responses, are potent vasodilators and secretagogues, and contract (directly or indirectly) many smooth muscles. Hemokinin induces plasma extravasation, mast cell degranulation, muscle contraction, salivary secretion and scratching behavior. Increases sperm motility. Induces potent analgesic effects and may play a role in pain modulation. Promotes survival of bone marrow B lineage cells and of cultured LPS-stimulated pre-B cells and may act as an autocrine factor required for B-cell survival and prolif [...] (170 aa)
Ago4Eukaryotic translation initiation factor 2C, 4 (Predicted). (597 aa)
Bmp2Bone morphogenetic protein 2; Induces cartilage and bone formation. Stimulates the differentiation of myoblasts into osteoblasts via the EIF2AK3-EIF2A- ATF4 pathway. BMP2 activation of EIF2AK3 stimulates phosphorylation of EIF2A which leads to increased expression of ATF4 which plays a central role in osteoblast differentiation. In addition stimulates TMEM119, which upregulates the expression of ATF4. Belongs to the TGF-beta family. (394 aa)
Spef1RCG26209, isoform CRA_a. (233 aa)
Rbm8aRNA-binding protein 8A; Required for pre-mRNA splicing as component of the spliceosome (By similarity). Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain [...] (174 aa)
Nudt22Uridine diphosphate glucose pyrophosphatase NUDT22; Hydrolyzes UDP-glucose to glucose 1-phosphate and UMP and UDP-galactose to galactose 1-phosphate and UMP. Preferred substrate is UDP-glucose. (308 aa)
Psmb4Proteasome subunit beta type-4; Component of the 20S core proteasome complex involved in the proteolytic degradation of most intracellular proteins. This complex plays numerous essential roles within the cell by associating with different regulatory particles. Associated with two 19S regulatory particles, forms the 26S proteasome and thus participates in the ATP- dependent degradation of ubiquitinated proteins. The 26S proteasome plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins that could impair cellular functions, and by removing pro [...] (232 aa)
Ucn2Urocortin-2; Suppresses food intake, delays gastric emptying and decreases heat-induced edema. Might represent an endogenous ligand for maintaining homeostasis after stress (By similarity); Belongs to the sauvagine/corticotropin-releasing factor/urotensin I family. (110 aa)
Mus81Crossover junction endonuclease MUS81; Interacts with EME1 and EME2 to form a DNA structure-specific endonuclease with substrate preference for branched DNA structures with a 5'-end at the branch nick. Typical substrates include 3'-flap structures, replication forks and nicked Holliday junctions. May be required in mitosis for the processing of stalled or collapsed replication forks (By similarity); Belongs to the XPF family. (551 aa)
ThTyrosine 3-monooxygenase; Plays an important role in the physiology of adrenergic neurons. (498 aa)
Med25Mediator complex subunit 25. (746 aa)
Ins2Insulin-2 A chain; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. (110 aa)
Cntnap1Contactin-associated protein 1; Required, with CNTNAP2, for radial and longitudinal organization of myelinated axons. Plays a role in the formation of functional distinct domains critical for saltatory conduction of nerve impulses in myelinated nerve fibers. Demarcates the paranodal region of the axo-glial junction. In association with contactin involved in the signaling between axons and myelinating glial cells. (1381 aa)
Med29Intersex-like (Drosophila) (Predicted). (199 aa)
Trpv3Transient receptor potential cation channel, subfamily V, member 3; Belongs to the transient receptor (TC 1.A.4) family. (791 aa)
BglapOsteocalcin; Constitutes 1-2% of the total bone protein. It binds strongly to apatite and calcium. (99 aa)
Trpv1Transient receptor potential cation channel subfamily V member 1; Ligand-activated non-selective calcium permeant cation channel involved in detection of noxious chemical and thermal stimuli. Seems to mediate proton influx and may be involved in intracellular acidosis in nociceptive neurons. Involved in mediation of inflammatory pain and hyperalgesia. Sensitized by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases, which involves PKC isozymes and PCL. Activation by vanilloids, like capsaicin, and temperatures higher than 42 degrees Celsius, exhibits [...] (838 aa)
Dlk2Protein delta homolog 2; Regulates adipogenesis. (382 aa)
Ampd1AMP deaminase 1; AMP deaminase plays a critical role in energy metabolism. (747 aa)
AgtAngiotensin 1-4; Essential component of the renin-angiotensin system (RAS), a potent regulator of blood pressure, body fluid and electrolyte homeostasis. [Angiotensin-3]: stimulates aldosterone release. Belongs to the serpin family. (477 aa)
Sidt2SID1 transmembrane family member 2; Mediates the translocation of RNA and DNA across the lysosomal membrane during RNA and DNA autophagy (RDA), a process in which RNA or DNA is directly imported into lysosomes in an ATP- dependent manner, and degraded. Involved in the uptake of single- stranded oligonucleotides by living cells, a process called gymnosis (By similarity). In vitro, mediates the uptake of linear DNA more efficiently than that of circular DNA, but exhibits similar uptake efficacy toward RNA and DNA. Binds long double-stranded RNA (dsRNA) (500 - 700 base pairs), but not dsR [...] (979 aa)
EtfbElectron transfer flavoprotein subunit beta; Heterodimeric electron transfer flavoprotein that accepts electrons from several mitochondrial dehydrogenases, including acyl-CoA dehydrogenases, glutaryl-CoA and sarcosine dehydrogenase. It transfers the electrons to the main mitochondrial respiratory chain via ETF-ubiquinone oxidoreductase. Required for normal mitochondrial fatty acid oxidation and normal amino acid metabolism. ETFB binds an AMP molecule that probably has a purely structural role (By similarity). (255 aa)
PnlipPancreatic triacylglycerol lipase; Plays an important role in fat metabolism. It preferentially splits the esters of long-chain fatty acids at positions 1 and 3, producing mainly 2-monoacylglycerol and free fatty acids, and shows considerably higher activity against insoluble emulsified substrates than against soluble ones. (465 aa)
PlvapPlasmalemma vesicle-associated protein; Endothelial cell-specific membrane protein involved in the formation of the diaphragms that bridge endothelial fenestrae. It is also required for the formation of stomata of caveolae and transendothelial channels. Functions in microvascular permeability, endothelial fenestrae contributing to the passage of water and solutes and regulating transcellular versus paracellular flow in different organs. Plays a specific role in embryonic development. (438 aa)
C1ql3Complement C1q-like 3. (255 aa)
OtoaOtoancorin. (1137 aa)
Zfp335Zinc finger protein 335; Component or associated component of some histone methyltransferase complexes may regulate transcription through recruitment of those complexes on gene promoters. Enhances ligand- dependent transcriptional activation by nuclear hormone receptors. Plays an important role in neural progenitor cell proliferation and self-renewal through the regulation of specific genes involved brain development, including REST. Also controls the expression of genes involved in somatic development and regulates, for instance, lymphoblast proliferation. (1337 aa)
Me3Malic enzyme. (605 aa)
CsprsComponent of Sp100-rs. (309 aa)
Calb2Calretinin; Calretinin is a calcium-binding protein which is abundant in auditory neurons. (271 aa)
DolkTransmembrane protein 15 (Predicted). (536 aa)
Lbx1Transcription factor LBX1; Transcription factor required for the development of GABAergic interneurons in the dorsal horn of the spinal cord and migration and further development of hypaxial muscle precursor cells for limb muscles, diaphragm and hypoglossal cord. (285 aa)
Lsm1U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation. (133 aa)
Alg10Putative Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase; Putative alpha-1,2-glucosyltransferase, which adds the third glucose residue to the lipid-linked oligosaccharide precursor for N- linked glycosylation. Transfers glucose from dolichyl phosphate glucose (Dol-P-Glc) onto the lipid-linked oligosaccharide Glc(2)Man(9)GlcNAc(2)-PP-Dol (By similarity). When coupled to KCNH2 may reduce KCNH2 sensitivity to classic proarrhythmic drug blockade, possibly by mediating glycosylation of KCNH2. Has a role in maintenance of cochlear outer hair cell function (By similarity) [...] (474 aa)
Cib3Calcium and integrin-binding family member 3. (187 aa)
Txndc17Thioredoxin-like 5 (Predicted), isoform CRA_b. (123 aa)
Edn1Big endothelin-1; Endothelins are endothelium-derived vasoconstrictor peptides (By similarity). Probable ligand for G-protein coupled receptors EDNRA and EDNRB which activates PTK2B, BCAR1, BCAR3 and, GTPases RAP1 and RHOA cascade in glomerular mesangial cells (By similarity). Belongs to the endothelin/sarafotoxin family. (202 aa)
PthParathyroid hormone; PTH elevates calcium level by dissolving the salts in bone and preventing their renal excretion. Stimulates [1-14C]-2-deoxy-D- glucose (2DG) transport and glycogen synthesis in osteoblastic cells (By similarity); Belongs to the parathyroid hormone family. (115 aa)
Hmox1Heme oxygenase 1; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase. Under physiological conditions, the activity of heme oxygenase is highest in the spleen, where senescent erythrocytes are sequestrated and destroyed. Exhibits cytoprotective effects since excess of free heme sensitizes cells to undergo apoptosis. (289 aa)
Prickle4Prickle planar cell polarity protein 4. (361 aa)
Elof1Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
Dll4Delta-like protein 4; Involved in the Notch signaling pathway as Notch ligand. Activates NOTCH1 and NOTCH4. Involved in angiogenesis; negatively regulates endothelial cell proliferation and migration and angiogenic sprouting. Essential for retinal progenitor proliferation. Required for suppressing rod fates in late retinal progenitors as well as for proper generation of other retinal cell types. During spinal cord neurogenesis, inhibits V2a interneuron fate (By similarity). (686 aa)
Sp7Specificity protein 7 alpha. (428 aa)
C1qtnf9C1q and TNF-related 9. (367 aa)
Snrnp48Small nuclear ribonucleoprotein U11/U12 subunit 48. (337 aa)
Defa5Neutrophil antibiotic peptide NP-2; Active in vitro against S.aureus, fungi, Gram-positive and Gram-negative bacteria and to a lesser extent against an enveloped virus. (94 aa)
Bpifb6Bactericidal/permeability-increasing protein-like 3 (Predicted). (129 aa)
Rbl2Retinoblastoma-like protein 2; Key regulator of entry into cell division. Directly involved in heterochromatin formation by maintaining overall chromatin structure and, in particular, that of constitutive heterochromatin by stabilizing histone methylation. Recruits and targets histone methyltransferases KMT5B and KMT5C, leading to epigenetic transcriptional repression. Controls histone H4 'Lys-20' trimethylation. Probably acts as a transcription repressor by recruiting chromatin-modifying enzymes to promoters. Potent inhibitor of E2F-mediated trans-activation, associates preferentially [...] (1135 aa)
Ptk6Tyrosine-protein kinase. (451 aa)
Nup58Nucleoporin p58/p45; Component of the nuclear pore complex, a complex required for the trafficking across the nuclear membrane. (585 aa)
Tsc1Hamartin; In complex with TSC2, inhibits the nutrient-mediated or growth factor-stimulated phosphorylation of S6K1 and EIF4EBP1 by negatively regulating mTORC1 signaling (By similarity). Implicated as a tumor suppressor. Involved in microtubule-mediated protein transport, but this seems to be due to unregulated mTOR signaling. Acts as a co-chaperone for HSP90AA1 facilitating HSP90AA1 chaperoning of protein clients such as kinases, TSC2 and glucocorticoid receptor NR3C1 (By similarity). Increases ATP binding to HSP90AA1 and inhibits HSP90AA1 ATPase activity (By similarity). Competes wit [...] (1163 aa)
Khdrbs2KH domain-containing, RNA-binding, signal transduction-associated protein 2; RNA-binding protein that plays a role in the regulation of alternative splicing and influences mRNA splice site selection and exon inclusion. Its phosphorylation by FYN inhibits its ability to regulate splice site selection. Induces an increased concentration-dependent incorporation of exon in CD44 pre-mRNA by direct binding to purine-rich exonic enhancer. May function as an adapter protein for Src kinases during mitosis (By similarity). Binds both poly(A) and poly(U) homopolymers (By similarity). Phosphorylat [...] (349 aa)
PkiacAMP-dependent protein kinase inhibitor alpha; Extremely potent competitive inhibitor of cAMP-dependent protein kinase activity, this protein interacts with the catalytic subunit of the enzyme after the cAMP-induced dissociation of its regulatory chains. (76 aa)
Sox2SRY-box transcription factor 2. (319 aa)
Tsc2Tuberin; In complex with TSC1, this tumor suppressor inhibits the nutrient-mediated or growth factor-stimulated phosphorylation of S6K1 and EIF4EBP1 by negatively regulating mTORC1 signaling (By similarity). Acts as a GTPase-activating protein (GAP) for the small GTPase RHEB, a direct activator of the protein kinase activity of mTORC1 (By similarity). May also play a role in microtubule-mediated protein transport. Also stimulates the intrinsic GTPase activity of the Ras-related proteins RAP1A and RAB5. (1809 aa)
Mapre1Microtubule-associated protein RP/EB family member 1; Plus-end tracking protein (+TIP) that binds to the plus-end of microtubules and regulates the dynamics of the microtubule cytoskeleton. Promotes cytoplasmic microtubule nucleation and elongation. May be involved in spindle function by stabilizing microtubules and anchoring them at centrosomes. Also acts as a regulator of minus-end microtubule organization: interacts with the complex formed by AKAP9 and PDE4DIP, leading to recruit CAMSAP2 to the Golgi apparatus, thereby tethering non-centrosomal minus-end microtubules to the Golgi, a [...] (268 aa)
Ins1Insulin-1 A chain; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver. (110 aa)
Tbl1xr1Transducin (Beta)-like 1X-linked receptor 1 (Predicted). (514 aa)
FurinFurin; Ubiquitous endoprotease within constitutive secretory pathways capable of cleavage at the RX(K/R)R consensus motif. Mediates processing of TGFB1, an essential step in TGF-beta-1 activation. (793 aa)
Stard5Similar to StAR-related protein 1-4E (Predicted), isoform CRA_a. (213 aa)
Atp13a1Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1197 aa)
Pcsk1Neuroendocrine convertase 1; Involved in the processing of hormone and other protein precursors at sites comprised of pairs of basic amino acid residues. Substrates include POMC, renin, enkephalin, dynorphin, somatostatin, insulin and AGRP; Belongs to the peptidase S8 family. Furin subfamily. (752 aa)
Spin1Spindlin-1; Chromatin reader that specifically recognizes and binds histone H3 both trimethylated at 'Lys-4' and asymmetrically dimethylated at 'Arg-8' (H3K4me3 and H3R8me2a) and acts as an activator of Wnt signaling pathway downstream of PRMT2. In case of cancer, promotes cell cancer proliferation via activation of the Wnt signaling pathway. Overexpression induces metaphase arrest and chromosomal instability. Localizes to active rDNA loci and promotes the expression of rRNA genes. May play a role in cell-cycle regulation during the transition from gamete to embryo. Involved in oocyte [...] (262 aa)
Tmem203Transmembrane protein 203. (136 aa)
Msh4DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (911 aa)
Casp3Caspase-3 subunit p12; Involved in the activation cascade of caspases responsible for apoptosis execution. At the onset of apoptosis it proteolytically cleaves poly(ADP-ribose) polymerase (PARP) at a '216-Asp-|-Gly-217' bond. Cleaves and activates sterol regulatory element binding proteins (SREBPs) between the basic helix-loop-helix leucine zipper domain and the membrane attachment domain. Cleaves and activates caspase-6, -7 and -9. Triggers cell adhesion in sympathetic neurons through RET cleavage (By similarity); Belongs to the peptidase C14A family. (277 aa)
Mpp4MAGUK p55 subfamily member 4; May play a role in retinal photoreceptors development. (635 aa)
EsrrbSteroid hormone receptor ERR2; Transcription factor that binds a canonical ESRRB recognition (ERRE) sequence 5'TCAAGGTCA-3' localized on promoter and enhancer of targets genes regulating their expression or their transcription activity (By similarity). Plays a role, in a LIF independent manner, in maintainance of self-renewal and pluripotency of embryonic and trophoblast stem cells through different signaling pathways including FGF signaling pathway and Wnt signaling pathways. Upon FGF signaling pathway activation, interacts with KDM1A by directly binding to enhancer site of ELF5 and E [...] (433 aa)
Prickle3Prickle planar cell polarity protein 3. (623 aa)
Il6Interleukin-6; Cytokine with a wide variety of biological functions. It is a potent inducer of the acute phase response. Plays an essential role in the final differentiation of B-cells into Ig-secreting cells Involved in lymphocyte and monocyte differentiation. Acts on B-cells, T-cells, hepatocytes, hematopoietic progenitor cells and cells of the CNS. Required for the generation of T(H)17 cells. Also acts as a myokine. It is discharged into the bloodstream after muscle contraction and acts to increase the breakdown of fats and to improve insulin resistance. It induces myeloma and plasm [...] (211 aa)
Chmp4cCharged multivesicular body protein 4c; Probable core component of the endosomal sorting required for transport complex III (ESCRT-III) which is involved in multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. The MVB pathway appears to require the sequential functio [...] (232 aa)
GaleUDP-glucose 4-epimerase; Catalyzes two distinct but analogous reactions: the reversible epimerization of UDP-glucose to UDP-galactose and the reversible epimerization of UDP-N-acetylglucosamine to UDP-N- acetylgalactosamine. The reaction with UDP-Gal plays a critical role in the Leloir pathway of galactose catabolism in which galactose is converted to the glycolytic intermediate glucose 6-phosphate. It contributes to the catabolism of dietary galactose and enables the endogenous biosynthesis of both UDP-Gal and UDP-GalNAc when exogenous sources are limited. Both UDP-sugar interconversi [...] (348 aa)
Exoc7Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. In adipocytes, plays a crucial role in targeting SLC2A4 vesicle to the plasma membrane in response to insulin, perhaps directing the vesicle to the precise site of fusion (By similarity); Belongs to the EXO70 family. (653 aa)
LOC103689974Tumor necrosis factor ligand superfamily member 11, membrane form; Cytokine that binds to TNFRSF11B/OPG and to TNFRSF11A/RANK. Osteoclast differentiation and activation factor. Augments the ability of dendritic cells to stimulate naive T-cell proliferation. May be an important regulator of interactions between T-cells and dendritic cells and may play a role in the regulation of the T-cell-dependent immune response. May also play an important role in enhanced bone-resorption in humoral hypercalcemia of malignancy. Induces osteoclastogenesis by activating multiple signaling pathways in o [...] (318 aa)
Dtd1D-aminoacyl-tRNA deacylase. (209 aa)
Serpina6Corticosteroid-binding globulin; Major transport protein for glucocorticoids and progestins in the blood of almost all vertebrate species. Belongs to the serpin family. (396 aa)
Erg28Similar to HSPC288 (Predicted), isoform CRA_b. (140 aa)
NansN-acetylneuraminic acid synthase (Sialic acid synthase) (Predicted), isoform CRA_a. (359 aa)
Ssrp1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (709 aa)
Csrp1Cysteine and glycine-rich protein 1; Could play a role in neuronal development. (193 aa)
MioxInositol oxygenase. (289 aa)
Ets1Protein C-ets-1; Transcription factor. Directly controls the expression of cytokine and chemokine genes in a wide variety of different cellular contexts. May control the differentiation, survival and proliferation of lymphoid cells. May also regulate angiogenesis through regulation of expression of genes controlling endothelial cell migration and invasion (By similarity); Belongs to the ETS family. (441 aa)
AlkTyrosine-protein kinase receptor. (1396 aa)
Oser1Oxidative stress-responsive serine-rich protein 1. (291 aa)
Ddx47DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, isoform CRA_a; Belongs to the DEAD box helicase family. (455 aa)
Gjd2Gap junction delta-2 protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell; Belongs to the connexin family. Delta-type subfamily. (321 aa)
FosProto-oncogene c-Fos; Nuclear phosphoprotein which forms a tight but non-covalently linked complex with the JUN/AP-1 transcription factor. On TGF-beta activation, forms a multimeric SMAD3/SMAD4/JUN/FOS complex, at the AP1/SMAD-binding site to regulate TGF-beta-mediated signaling (By similarity). Has a critical function in regulating the development of cells destined to form and maintain the skeleton. It is thought to have an important role in signal transduction, cell proliferation and differentiation. In growing cells, activates phospholipid synthesis, possibly by activating CDS1 and [...] (380 aa)
Ehd4EH-domain-containing 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (541 aa)
Tac1C-terminal-flanking peptide; Tachykinins are active peptides which excite neurons, evoke behavioral responses, are potent vasodilators and secretagogues, and contract (directly or indirectly) many smooth muscles; Belongs to the tachykinin family. (130 aa)
Meox2Homeobox protein MOX-2; Mesodermal transcription factor that plays a key role in somitogenesis and is required for sclerotome development. Activates expression of CDKN1A and CDKN2A in endothelial cells, acting as a regulator of vascular cell proliferation. While it activates CDKN1A in a DNA-dependent manner, it activates CDKN2A in a DNA-independent manner. May have a regulatory role when quiescent vascular smooth muscle cells reenter the cell cycle. (303 aa)
Cspp1Centrosome and spindle pole-associated protein 1. (1203 aa)
Abi3ABI gene family, member 3, isoform CRA_b. (367 aa)
Nlrc4NLR family CARD domain-containing protein 4; Key component of inflammasomes that indirectly senses specific proteins from pathogenic bacteria and fungi and responds by assembling an inflammasome complex that promotes caspase-1 activation, cytokine production and macrophage pyroptosis. The NLRC4 inflammasome is activated as part of the innate immune response to a range of intracellular bacteria. (1023 aa)
Art4NAD(P)(+)--arginine ADP-ribosyltransferase. (306 aa)
Ppp3r2Calcineurin subunit B type 2; Regulatory subunit of calcineurin, a calcium-dependent, calmodulin stimulated protein phosphatase. Confers calcium sensitivity. (176 aa)
Ubxn2aRCG62119, isoform CRA_a. (258 aa)
Cstl1Cystatin-like 1 (Predicted). (140 aa)
Cela1Chymotrypsin-like elastase family member 1; Acts upon elastin. (266 aa)
Il1bInterleukin-1 beta; Potent proinflammatory cytokine. Initially discovered as the major endogenous pyrogen, induces prostaglandin synthesis, neutrophil influx and activation, T-cell activation and cytokine production, B- cell activation and antibody production, and fibroblast proliferation and collagen production. Promotes Th17 differentiation of T-cells. Synergizes with IL12/interleukin-12 to induce IFNG synthesis from T- helper 1 (Th1) cells. (268 aa)
Il10Interleukin-10; Major immune regulatory cytokine that acts on many cells of the immune system where it has profound anti-inflammatory functions, limiting excessive tissue disruption caused by inflammation. Mechanistically, IL10 binds to its heterotetrameric receptor comprising IL10RA and IL10RB leading to JAK1 and STAT2-mediated phosphorylation of STAT3. In turn, STAT3 translocates to the nucleus where it drives expression of anti-inflammatory mediators. Targets antigen-presenting cells (APCs) such as macrophages and monocytes and inhibits their release of pro-inflammatory cytokines in [...] (178 aa)
Sec14l3Similar to SEC14 (S. cerevisiae)-like 2 (Predicted), isoform CRA_b. (412 aa)
Dlx4Distal-less homeobox 4 (Predicted). (238 aa)
Thap2THAP domain-containing 2. (217 aa)
Nphs2Podocin; Plays a role in the regulation of glomerular permeability, acting probably as a linker between the plasma membrane and the cytoskeleton; Belongs to the band 7/mec-2 family. (383 aa)
SnrkSNF-related serine/threonine-protein kinase; May play a role in hematopoietic cell proliferation or differentiation. Potential mediator of neuronal apoptosis. (746 aa)
Cd55Decay accelarating factor 1, isoform CRA_d. (382 aa)
Nup85Nuclear pore complex protein Nup85; Essential component of the nuclear pore complex (NPC) that seems to be required for NPC assembly and maintenance. As part of the NPC Nup107-160 subcomplex plays a role in RNA export and in tethering NUP96/Nup98 and NUP153 to the nucleus. The Nup107-160 complex seems to be required for spindle assembly during mitosis. NUP85 is required for membrane clustering of CCL2-activated CCR2. Seems to be involved in CCR2-mediated chemotaxis of monocytes and may link activated CCR2 to the phosphatidyl-inositol 3-kinase-Rac-lammellipodium protrusion cascade. Invo [...] (656 aa)
Hmox2Heme oxygenase 2; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase. Under physiological conditions, the activity of heme oxygenase is highest in the spleen, where senescent erythrocytes are sequestrated and destroyed. Heme oxygenase 2 could be implicated in the production of carbon monoxide in brain where it could act as a neurotransmitter. (315 aa)
Tlr5Toll-like receptor 5; Belongs to the Toll-like receptor family. (871 aa)
Elac2Zinc phosphodiesterase ELAC protein 2; Zinc phosphodiesterase, which displays mitochondrial tRNA 3'- processing endonuclease activity. Involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA (By similarity). (827 aa)
C1ql1Complement component 1, q subcomponent-like 1 (Predicted). (235 aa)
Akap4A-kinase anchor protein 4; Major structural component of sperm fibrous sheath. May play a role in sperm motility (By similarity). (730 aa)
AlbSerum albumin; Serum albumin, the main protein of plasma, has a good binding capacity for water, Ca(2+), Na(+), K(+), fatty acids, hormones, bilirubin and drugs. Its main function is the regulation of the colloidal osmotic pressure of blood. Major zinc transporter in plasma, typically binds about 80% of all plasma zinc (By similarity). Major calcium and magnesium transporter in plasma, binds approximately 45% of circulating calcium and magnesium in plasma (By similarity). Potentially has more than two calcium-binding sites and might additionally bind calcium in a non-specific manner (B [...] (608 aa)
AfpAlpha-fetoprotein; Binds estrogens, fatty acids and metals; Belongs to the ALB/AFP/VDB family. (611 aa)
Eef2kmtEukaryotic elongation factor 2 lysine methyltransferase. (335 aa)
Rtl3Retrotransposon Gag-like 3. (556 aa)
HlxH2.0-like homeobox protein; Transcription factor required for TBX21/T-bet-dependent maturation of Th1 cells as well as maintenance of Th1-specific gene expression. Involved in embryogenesis and hematopoiesis (By similarity); Belongs to the H2.0 homeobox family. (476 aa)
Barhl2BarH-like 2 homeobox protein; Potential regulator of neural basic helix-loop-helix genes. It may down-regulate expression of ASCL1 and, within the thalamus, up- regulate NGN2, thereby regulating distinct patterns of neuronal differentiation; Belongs to the BAR homeobox family. (384 aa)
Sidt1SID1 transmembrane family member 1; In vitro binds long double-stranded RNA (dsRNA) (500 and 700 base pairs), but not dsRNA shorter than 300 bp. Not involved in RNA autophagy, a process in which RNA is directly imported into lysosomes in an ATP-dependent manner, and degraded. Belongs to the SID1 family. (681 aa)
Vcsa2Variable coding sequence A2. (115 aa)
Tprg1Similar to RIKEN cDNA 1200015A19 (Predicted). (278 aa)
Opa1Dynamin-like 120 kDa protein, mitochondrial; Dynamin-related GTPase that is essential for normal mitochondrial morphology by regulating the equilibrium between mitochondrial fusion and mitochondrial fission. Coexpression of isoform 1 with shorter alternative products is required for optimal activity in promoting mitochondrial fusion. Binds lipid membranes enriched in negatively charged phospholipids, such as cardiolipin, and promotes membrane tubulation. The intrinsic GTPase activity is low, and is strongly increased by interaction with lipid membranes (By similarity). Plays a role in [...] (960 aa)
Ripk4Receptor-interacting serine-threonine kinase 4. (786 aa)
N6amt1N-6 adenine-specific DNA methyltransferase 1. (214 aa)
Tecpr1Tectonin beta-propeller repeat-containing protein 1; Tethering factor involved in autophagy. Involved in autophagosome maturation by promoting the autophagosome fusion with lysosomes: acts by associating with both the ATG5-ATG12 conjugate and phosphatidylinositol-3-phosphate (PtdIns(3)P) present at the surface of autophagosomes. Also involved in selective autophagy against bacterial pathogens, by being required for phagophore/preautophagosomal structure biogenesis and maturation (By similarity); Belongs to the TECPR1 family. (1166 aa)
LOC103694380Tumor necrosis factor, membrane form; Cytokine that binds to TNFRSF1A/TNFR1 and TNFRSF1B/TNFBR. It is mainly secreted by macrophages and can induce cell death of certain tumor cell lines. It is potent pyrogen causing fever by direct action or by stimulation of interleukin-1 secretion and is implicated in the induction of cachexia, Under certain conditions it can stimulate cell proliferation and induce cell differentiation (By similarity). Induces insulin resistance in adipocytes via inhibition of insulin-induced IRS1 tyrosine phosphorylation and insulin-induced glucose uptake. Induces [...] (235 aa)
Jmjd1cJumonji domain-containing 1C. (2525 aa)
B3galt4Beta-1,3-galactosyltransferase 4; Involved in GM1/GD1B/GA1 ganglioside biosynthesis. Belongs to the glycosyltransferase 31 family. (371 aa)
Thoc3THO complex 3 (Predicted). (351 aa)
Muc5acUncharacterized protein. (1103 aa)
Ago1Argonaute RISC component 1; Belongs to the argonaute family. (857 aa)
Dsg3Desmoglein 3. (1043 aa)
Tspan1Tetraspanin-1. (241 aa)
NgfBeta-nerve growth factor; Nerve growth factor is important for the development and maintenance of the sympathetic and sensory nervous systems. Extracellular ligand for the NTRK1 and NGFR receptors, activates cellular signaling cascades to regulate neuronal proliferation, differentiation and survival (By similarity). The immature NGF precursor (proNGF) functions as ligand for the heterodimeric receptor formed by SORCS2 and NGFR, and activates cellular signaling cascades that lead to inactivation of RAC1 and/or RAC2, reorganization of the actin cytoskeleton and neuronal growth cone colla [...] (293 aa)
Pik3caPhosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; Phosphoinositide-3-kinase (PI3K) that phosphorylates PtdIns (Phosphatidylinositol), PtdIns4P (Phosphatidylinositol 4-phosphate) and PtdIns(4,5)P2 (Phosphatidylinositol 4,5-bisphosphate) to generate phosphatidylinositol 3,4,5-trisphosphate (PIP3) (By similarity). PIP3 plays a key role by recruiting PH domain-containing proteins to the membrane, including AKT1 and PDPK1, activating signaling cascades involved in cell growth, survival, proliferation, motility and morphology (By similarity). Participates in cel [...] (1068 aa)
Ccdc83Coiled-coil domain-containing 83. (293 aa)
ActbActin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (378 aa)
Rcor2REST corepressor 2-like. (523 aa)
Smr3bSubmandibular gland peptide T; Sialorphin may be involved in the modulation of mineral balance between at least four systems: kidney, bone, tooth and circulation. Sialorphin is an endogenous inhibitor of neprilysin. Inhibits the breakdown of Met-enkephalin and substance P in isolated tissue from the dorsal zone of the rat spinal cord. Has an analgesic effect when administered to rats by intravenous injection. (146 aa)
InsrrInsulin receptor-related protein; Receptor with tyrosine-protein kinase activity. Functions as a pH sensing receptor which is activated by increased extracellular pH. Activates an intracellular signaling pathway that involves IRS1 and AKT1/PKB. (1300 aa)
Me2Malic enzyme. (591 aa)
LOC685590Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1063 aa)
Noa1MMR_HSR1 domain containing protein RGD1359460, isoform CRA_a. (694 aa)
Gata5Similar to Transcription factor GATA-5 (GATA binding factor-5). (404 aa)
Dnajc22DnaJ homolog subfamily C member 22; May function as a co-chaperone. (341 aa)
Amy2a3Pancreatic alpha-amylase. (508 aa)
SpdyaSpeedy protein A; Regulates the G1/S phase transition of the cell cycle by binding and activating CDK1 and CDK2. Contributes to CDK2 activation without promoting CDK2 phosphorylation, by inducing a conformation change of the CDK2 T-loop that obstructs the substrate-binding cleft prior to kinase activation. Interferes with CDKN1B-mediated inhibition of CDK2. Mediates cell survival during the DNA damage process through activation of CDK2; Belongs to the Speedy/Ringo family. (312 aa)
A0A0G2K8X5_RATUncharacterized protein. (1032 aa)
Ranbp6RAN-binding protein 6. (1105 aa)
Lsg1Large subunit GTPase 1 homolog; GTPase required for the XPO1/CRM1-mediated nuclear export of the 60S ribosomal subunit. Probably acts by mediating the release of NMD3 from the 60S ribosomal subunit after export into the cytoplasm (By similarity). (655 aa)
Myo1eUnconventional myosin-Ie; Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails bind to membranous compartments, which are then moved relative to actin filaments. Binds to membranes containing anionic phospholipids via its tail domain. Required for normal morphology of the glomerular basement membrane, normal development of foot processes by kidney podocytes and normal kidney function (By similarity). In dendritic cells, may control the movement of class II-containing cytoplasmic vesicles alon [...] (998 aa)
Sfrp4Secreted frizzled-related protein 4; Soluble frizzled-related proteins (sFRPS) function as modulators of Wnt signaling through direct interaction with Wnts. They have a role in regulating cell growth and differentiation in specific cell types (By similarity). SFRP4 plays a role in bone morphogenesis (By similarity). May also act as a regulator of adult uterine morphology and function. May also increase apoptosis during ovulation possibly through modulation of FZ1/FZ4/WNT4 signaling. Has phosphaturic effects by specifically inhibiting sodium-dependent phosphate uptake (By similarity). (348 aa)
Grk3Beta-adrenergic receptor kinase 2; Specifically phosphorylates the agonist-occupied form of the beta-adrenergic and closely related receptors. (685 aa)
Spo11SPO11, initiator of meiotic double stranded breaks. (367 aa)
A0A0G2KA35_RATADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (162 aa)
Sde2Replication stress response regulator SDE2; Involved in both DNA replication and cell cycle control. Unprocessed SDE2 interacts with PCNA via its PIP-box. The interaction with PCNA prevents monoubiquitination of the latter thereby inhibiting translesion DNA synthesis. The binding of SDE2 to PCNA also leads to processing of SDE2 by an unidentified deubiquitinating enzyme, cleaving off the N-terminal ubiquitin-like domain. The resulting mature SDE2 is degraded by the DCX(DTL) complex in a cell cycle- and DNA damage dependent manner. Binding of SDE2 to PCNA is necessary to counteract dama [...] (459 aa)
Dsc1Desmocollin 1. (843 aa)
Knl1Kinetochore scaffold 1. (2114 aa)
Ptpdc1Protein tyrosine phosphatase domain-containing 1. (796 aa)
Nup62clSimilar to Nucleoporin 62 (Predicted). (273 aa)
Pou5f2POU domain, class 5, transcription factor 2; Transcription factor that binds preferentially to the octamer motif (5'-ATGTTAAT-3'). May exert a regulatory function in meiotic events that are required for terminal differentiation of male germ cell; Belongs to the POU transcription factor family. Class-5 subfamily. (335 aa)
Zfp951-2Zinc finger protein 951. (417 aa)
Plekhg2Pleckstrin homology and RhoGEF domain-containing G2. (1344 aa)
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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