STRINGSTRING
Cela1 Cela1 Reg3b Reg3b Reg3a Reg3a Reg3g Reg3g Cpa1 Cpa1 Prtn3 Prtn3 Elane Elane S100a9 S100a9 S100a8 S100a8 LOC312273 LOC312273 LOC286960 LOC286960 Spink1 Spink1 Prss3 Prss3 Spink3 Spink3 Pglyrp1 Pglyrp1 Cela2a Cela2a Ctrc Ctrc Defa5 Defa5 Defa24 Defa24 Prss2 Prss2 Lbp Lbp Zg16 Zg16 F2rl2 F2rl2 Ctrb1 Ctrb1 Ctrl Ctrl Sycn Sycn Camp Camp Ms4a3 Ms4a3 Serpina16 Serpina16 Ngp Ngp Try5 Try5 Cela3b Cela3b Cpa2 Cpa2 Gtpbp1 Gtpbp1 Try4 Try4 Defa9 Defa9 Prss1 Prss1 LOC683849 LOC683849 Defa8 Defa8 Cuzd1 Cuzd1 Defa6 Defa6 Defal1 Defal1 LOC102554637 LOC102554637 Slpil2 Slpil2 Cpb1 Cpb1 Try10 Try10 Ltf Ltf Bpi Bpi Defa11 Defa11 Defa10 Defa10 Ctsg Ctsg F2rl1 F2rl1 F2rl3 F2rl3 Slpi Slpi LOC103690289 LOC103690289 Gp2 Gp2 LOC100911551 LOC100911551 Mcpt8 Mcpt8 RatNP-3b RatNP-3b Mpo Mpo A0A0G2K1E4_RAT A0A0G2K1E4_RAT Np4 Np4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cela1Chymotrypsin-like elastase family member 1; Acts upon elastin. (266 aa)
Reg3bRegenerating islet-derived protein 3-beta 16.5 kDa form; Bactericidal C-type lectin which acts against several intestinal Gram-positive bacteria and Gram-negative bacteria. Lacks antibacterial activity against S.typhimurium. May play a role in protection against infection with S.enteritidis by inhibiting its translocation from the gut lumen into intestinal tissues and further extraintestinal tissues (By similarity). (180 aa)
Reg3aRegenerating islet-derived protein 3-alpha 16.5 kDa form; Bactericidal C-type lectin. Regulates keratinocyte proliferation and differentiation after skin injury via activation of EXTL3-PI3K-AKT signaling pathway (By similarity). (174 aa)
Reg3gRegenerating islet-derived protein 3-gamma 16.5 kDa form; Bactericidal C-type lectin which acts exclusively against Gram-positive bacteria and mediates bacterial killing by binding to surface-exposed carbohydrate moieties of peptidoglycan. Restricts bacterial colonization of the intestinal epithelial surface and consequently limits activation of adaptive immune responses by the microbiota. The uncleaved form has bacteriostatic activity, whereas the cleaved form has bactericidal activity against L.monocytogenes and methicillin-resistant S.aureus. Regulates keratinocyte proliferation and [...] (174 aa)
Cpa1Carboxypeptidase A1; Carboxypeptidase that catalyzes the release of a C-terminal amino acid, but has little or no action with -Asp, -Glu, -Arg, -Lys or -Pro. (419 aa)
Prtn3Proteinase 3 (Predicted); Belongs to the peptidase S1 family. (256 aa)
ElaneElastase 2, neutrophil (Predicted); Belongs to the peptidase S1 family. (271 aa)
S100a9Protein S100-A9; S100A9 is a calcium- and zinc-binding protein which plays a prominent role in the regulation of inflammatory processes and immune response. It can induce neutrophil chemotaxis, adhesion, can increase the bactericidal activity of neutrophils by promoting phagocytosis via activation of SYK, PI3K/AKT, and ERK1/2 and can induce degranulation of neutrophils by a MAPK-dependent mechanism. Predominantly found as calprotectin (S100A8/A9) which has a wide plethora of intra- and extracellular functions. The intracellular functions include: facilitating leukocyte arachidonic acid [...] (133 aa)
S100a8Protein S100-A8; S100A8 is a calcium- and zinc-binding protein which plays a prominent role in the regulation of inflammatory processes and immune response. It can induce neutrophil chemotaxis and adhesion. Predominantly found as calprotectin (S100A8/A9) which has a wide plethora of intra- and extracellular functions. The intracellular functions include: facilitating leukocyte arachidonic acid trafficking and metabolism, modulation of the tubulin-dependent cytoskeleton during migration of phagocytes and activation of the neutrophilic NADPH- oxidase. Activates NADPH-oxidase by facilitat [...] (89 aa)
LOC312273Trypsin V-A. (246 aa)
LOC286960Trypsin-4; Belongs to the peptidase S1 family. (247 aa)
Spink1Serine protease inhibitor Kazal-type 1-like; Serine protease inhibitor which exhibits anti-trypsin activity. In the pancreas, protects against trypsin-catalyzed premature activation of zymogens (By similarity). (79 aa)
Prss3Cationic trypsin-3. (247 aa)
Spink3Serine protease inhibitor Kazal-type 1; Serine protease inhibitor which exhibits anti-trypsin activity. In the pancreas, protects against trypsin-catalyzed premature activation of zymogens (By similarity). (79 aa)
Pglyrp1Peptidoglycan recognition protein 1; Pattern receptor that binds to murein peptidoglycans (PGN) of Gram-positive bacteria. Has bactericidal activity towards Gram-positive bacteria. May kill Gram-positive bacteria by interfering with peptidoglycan biosynthesis. Binds also to Gram-negative bacteria. Involved in innate immunity. Is microbicidal for Gram-positive and Gram-negative bacteria and yeast. May function in intracellular killing of bacteria (By similarity); Belongs to the N-acetylmuramoyl-L-alanine amidase 2 family. (183 aa)
Cela2aChymotrypsin-like elastase family member 2A; Acts upon elastin; Belongs to the peptidase S1 family. Elastase subfamily. (271 aa)
CtrcChymotrypsin-C; Has chymotrypsin-type protease activity and hypocalcemic activity. (268 aa)
Defa5Neutrophil antibiotic peptide NP-2; Active in vitro against S.aureus, fungi, Gram-positive and Gram-negative bacteria and to a lesser extent against an enveloped virus. (94 aa)
Defa24Defensin 5; Probably contributes to the antimicrobial barrier function of the small intestine; Belongs to the alpha-defensin family. (93 aa)
Prss2Anionic trypsin-2; Belongs to the peptidase S1 family. (246 aa)
LbpLipopolysaccharide-binding protein; Plays a role in the innate immune response. Binds to the lipid A moiety of bacterial lipopolysaccharides (LPS), a glycolipid present in the outer membrane of all Gram-negative bacteria. Acts as an affinity enhancer for CD14, facilitating its association with LPS. Promotes the release of cytokines in response to bacterial lipopolysaccharide; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family. (481 aa)
Zg16Zymogen granule membrane protein 16; May play a role in protein trafficking. May act as a linker molecule between the submembranous matrix on the luminal side of zymogen granule membrane (ZGM) and aggregated secretory proteins during granule formation in the TGN. (167 aa)
F2rl2Proteinase-activated receptor 3; Receptor for activated thrombin coupled to G proteins that stimulate phosphoinositide hydrolysis; Belongs to the G-protein coupled receptor 1 family. (368 aa)
Ctrb1Chymotrypsin B chain A; Belongs to the peptidase S1 family. (263 aa)
CtrlChymotrypsin-like, isoform CRA_a; Belongs to the peptidase S1 family. (264 aa)
SycnSyncollin; Functions in exocytosis in pancreatic acinar cells regulating the fusion of zymogen granules with each other. May have a pore-forming activity on membranes and regulate exocytosis in other exocrine tissues. (134 aa)
CampCathelicidin antimicrobial peptide. (175 aa)
Ms4a3Membrane spanning 4-domains A3. (213 aa)
Serpina16Serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 16; Belongs to the serpin family. (415 aa)
NgpNeutrophilic granule protein (Predicted). (168 aa)
Try5Trypsin 5; Belongs to the peptidase S1 family. (246 aa)
Cela3bElastase 3B, pancreatic (Predicted), isoform CRA_b; Belongs to the peptidase S1 family. (269 aa)
Cpa2Carboxypeptidase A2. (417 aa)
Gtpbp1GTP-binding protein 1; Promotes degradation of target mRNA species. Plays a role in the regulation of circadian mRNA stability. Binds GTP and has GTPase activity; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. GTPBP1 subfamily. (669 aa)
Try4Serine protease 3; Belongs to the peptidase S1 family. (246 aa)
Defa9Defensin alpha 9. (103 aa)
Prss1Anionic trypsin-1; Belongs to the peptidase S1 family. (246 aa)
LOC683849Similar to Anionic trypsin II precursor (Pretrypsinogen II); Belongs to the peptidase S1 family. (246 aa)
Defa8Defensin alpha 8. (103 aa)
Cuzd1CUB and zona pellucida-like domain-containing protein 1; CUZD1 antiserum inhibits cell attachment and proliferation of ovarian cancer cells so may play a role in these processes. May play a role in trypsin activation in pancreatic acinar cells. May also play a role in the uterus during late pregnancy (By similarity). (607 aa)
Defa6Defensin alpha 6. (95 aa)
Defal1Defensin alpha-like protein 1; Intestinal defense peptide. Has potent antibacterial activity against Gram- negative bacteria E.coli O157:H7, S.typhimurium DT104, and K.pneumoniae; and against Gram-positive bacteria S.aureus, methicillin- resistant S.aureus and L.monocytogenes. Remains active in the presence of NaCl and Mg(2+). Probably functions by disrupting bacterial membrane integrity. However, does not show cytotoxic activity towards human intestinal cells. Belongs to the alpha-defensin family. (87 aa)
LOC102554637Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (246 aa)
Slpil2Antileukoproteinase-like 2. (131 aa)
Cpb1Carboxypeptidase B. (415 aa)
Try10Trypsin 10; Belongs to the peptidase S1 family. (246 aa)
LtfLactotransferrin (Predicted); Belongs to the transferrin family. (709 aa)
BpiBactericidal permeability-increasing protein; The cytotoxic action of BPI is limited to many species of Gram-negative bacteria; this specificity may be explained by a strong affinity of the very basic N-terminal half for the negatively charged lipopolysaccharides that are unique to the Gram-negative bacterial outer envelope. (482 aa)
Defa11Defensin alpha 11. (104 aa)
Defa10Defensin alpha 10. (90 aa)
CtsgCathepsin G. (250 aa)
F2rl1Proteinase-activated receptor 2; Receptor for trypsin and trypsin-like enzymes coupled to G proteins. Its function is mediated through the activation of several signaling pathways including phospholipase C (PLC), intracellular calcium, mitogen-activated protein kinase (MAPK), I-kappaB kinase/NF- kappaB and Rho. Can also be transactivated by cleaved F2R/PAR1. Involved in modulation of inflammatory responses and regulation of innate and adaptive immunity, and acts as a sensor for proteolytic enzymes generated during infection. Generally is promoting inflammation. Can signal synergistical [...] (397 aa)
F2rl3Proteinase-activated receptor 4; Receptor for activated thrombin or trypsin coupled to G proteins that stimulate phosphoinositide hydrolysis. May play a role in platelets activation. (395 aa)
SlpiSecretory leukocyte peptidase inhibitor. (131 aa)
LOC103690289Antileukoproteinase-like. (131 aa)
Gp2Pancreatic secretory granule membrane major glycoprotein GP2. (533 aa)
LOC100911551Glycoprotein V (platelet). (567 aa)
Mcpt8Mast cell protease 8; Belongs to the peptidase S1 family. Granzyme subfamily. (248 aa)
RatNP-3bNeutrophil antibiotic peptide NP-3B; Active in vitro against S.aureus, fungi, Gram-positive and Gram-negative bacteria and to a lesser extent against an enveloped virus; Belongs to the alpha-defensin family. (87 aa)
MpoMyeloperoxidase. (718 aa)
A0A0G2K1E4_RATC-type lectin domain-containing protein. (173 aa)
Np4Neutrophil antibiotic peptide NP-4. (96 aa)
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
Server load: low (24%) [HD]