STRINGSTRING
Gak Gak F1LR97_RAT F1LR97_RAT Cyth3 Cyth3 Ap4m1 Ap4m1 Ccdc91 Ccdc91 Tom1l1 Tom1l1 Cyth1 Cyth1 Epn3 Epn3 Arhgap44 Arhgap44 Gipc1 Gipc1 Cltc Cltc Clhc1 Clhc1 Arf6 Arf6 Arf2 Arf2 Ap4s1 Ap4s1 Lrrn3 Lrrn3 Pgap4 Pgap4 Sh3gl2 Sh3gl2 Frmd4b Frmd4b Dnm2 Dnm2 Necap2 Necap2 Mtss1 Mtss1 Necap1 Necap1 Prag1 Prag1 Baiap2l2 Baiap2l2 Ap3m1 Ap3m1 Myo6 Myo6 Amph Amph Fam193b Fam193b Tom1 Tom1 Eps15l1 Eps15l1 Ap5m1 Ap5m1 Clta Clta Ap2a1 Ap2a1 LOC100909548 LOC100909548 Fcho2 Fcho2 Epn1 Epn1 Ap2s1 Ap2s1 Igf2r Igf2r Rgs19 Rgs19 Pstpip2 Pstpip2 Mtss2 Mtss2 Cltb Cltb Bin3 Bin3 Arfip2 Arfip2 Gga2 Gga2 Ap3m2 Ap3m2 Ap3d1 Ap3d1 Ap3b2 Ap3b2 Psd Psd Fchsd1 Fchsd1 Ap4b1 Ap4b1 Sla2 Sla2 Rnd2 Rnd2 Cyth2 Cyth2 Hip1r Hip1r Snap91 Snap91 Hip1 Hip1 Ap5b1 Ap5b1 Arhgap20 Arhgap20 Enthd1 Enthd1 Ap4e1 Ap4e1 Arhgap42 Arhgap42 Bin2 Bin2 RGD1562485 RGD1562485 Olr883 Olr883 Dnm1 Dnm1 Dab2 Dab2 Ik Ik Aak1 Aak1 Itsn1 Itsn1 Ica1l Ica1l Wdr31 Wdr31 Scn10a Scn10a Tollip Tollip Fcho1 Fcho1 Fnbp1 Fnbp1 LOC102556447 LOC102556447 Rskr Rskr Aftph Aftph RGD1563104 RGD1563104 Plekhd1 Plekhd1 Bmp2k Bmp2k Eps15 Eps15 Gga1 Gga1 Synj2 Synj2 Sgip1 Sgip1 Pacsin2 Pacsin2 Synj1 Synj1 Ap2a2 Ap2a2 Ap3s1 Ap3s1 Arc Arc Dnm3 Dnm3 Dnmbp Dnmbp Asap3 Asap3 Itsn2 Itsn2 Snx9 Snx9 Sh3gl1 Sh3gl1 Rnf165 Rnf165 A0A096MJZ4_RAT A0A096MJZ4_RAT Gga3 Gga3 Arhgef37 Arhgef37 Clint1 Clint1 Ap3b1 Ap3b1 M6pr M6pr Pacsin1 Pacsin1 Ap2m1 Ap2m1 Pacsin3 Pacsin3 Synrg Synrg Dnajc6 Dnajc6 Arfip1 Arfip1 Ap5z1 Ap5z1 LOC103694867 LOC103694867 Spg11 Spg11 Reps1 Reps1 Cyth4 Cyth4 A0A0G2K1J7_RAT A0A0G2K1J7_RAT Reps2 Reps2 Fchsd2 Fchsd2 Ap2b1 Ap2b1 Cobl Cobl Ap3s2 Ap3s2 Arf1 Arf1 Ap5s1 Ap5s1 Sh3gl3 Sh3gl3 LOC100910792 LOC100910792 Sh3glb1 Sh3glb1 Zfyve26 Zfyve26 Trip10 Trip10 Epn2 Epn2 M0RCX5_RAT M0RCX5_RAT Sh3glb2 Sh3glb2 Ica1 Ica1 Picalm Picalm
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GakCyclin-G-associated kinase; Associates with cyclin G and CDK5. Seems to act as an auxilin homolog that is involved in the uncoating of clathrin-coated vesicles by Hsc70 in non-neuronal cells. Expression oscillates slightly during the cell cycle, peaking at G1 (By similarity); Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (1305 aa)
F1LR97_RATRho-GAP domain-containing protein. (776 aa)
Cyth3Cytohesin-3; Promotes guanine-nucleotide exchange on ARF1. Promotes the activation of ARF factors through replacement of GDP with GTP (By similarity). (388 aa)
Ap4m1AP-4 complex subunit mu-1; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. It is also involved in protein sorting to the basolateral membrane in epithelial cells and the proper asym [...] (453 aa)
Ccdc91Coiled-coil domain-containing protein 91; Involved in the regulation of membrane traffic through the trans-Golgi network (TGN). Functions in close cooperation with the GGAs in the sorting of hydrolases to lysosomes. (442 aa)
Tom1l1TOM1-like protein 1; Probable adapter protein involved in signaling pathways. Interacts with the SH2 and SH3 domains of various signaling proteins when it is phosphorylated. May promote FYN activation, possibly by disrupting intramolecular SH3-dependent interactions (By similarity). Belongs to the TOM1 family. (474 aa)
Cyth1Cytohesin-1; Promotes guanine-nucleotide exchange on ARF1, ARF5 and ARF6. Promotes the activation of ARF factors through replacement of GDP with GTP. Plays an important role in membrane trafficking, during junctional remodeling and epithelial polarization, through regulation of ARF6 activity. (397 aa)
Epn3Epsin-3; Belongs to the epsin family. (608 aa)
Arhgap44Rho GTPase-activating protein 44; GTPase-activating protein (GAP) that stimulates the GTPase activity of Rho-type GTPases. Thereby, controls Rho-type GTPases cycling between their active GTP-bound and inactive GDP-bound states. Acts as a GAP at least for CDC42 and RAC1. In neurons, is involved in dendritic spine formation and synaptic plasticity in a specific RAC1-GAP activity. Limits the initiation of exploratory dendritic filopodia. Recruited to actin- patches that seed filopodia, binds specifically to plasma membrane sections that are deformed inward by acto-myosin mediated contract [...] (797 aa)
Gipc1PDZ domain-containing protein GIPC1; May be involved in G protein-linked signaling. (333 aa)
CltcClathrin heavy chain 1; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles. Two different adapter protein complexes link the clathrin lattice either to the plasma membrane or to the trans- Golgi network (By similarity). Acts as component of the TACC3/ch- TOG/clathrin complex proposed to contribute to stabilization of kinetochore fibers of the mitotic spindle by acting as inter- microtubule bridge. The TACC3/ch- TOG/clathrin complex is required for the maintenance of kinetochore fiber tension (By similarity). Plays a role in early autophagosome formation (B [...] (1675 aa)
Clhc1Clathrin heavy chain linker domain-containing protein 1. (585 aa)
Arf6ADP-ribosylation factor 6; GTP-binding protein involved in protein trafficking that regulates endocytic recycling and cytoskeleton remodeling. Required for normal completion of mitotic cytokinesis. Involved in the regulation of dendritic spine development, contributing to the regulation of dendritic branching and filopodia extension. Plays an important role in membrane trafficking, during junctional remodeling and epithelial polarization. Regulates surface levels of adherens junction proteins such as CDH1. Required for NTRK1 sorting to the recycling pathway from early endosomes ; Belon [...] (175 aa)
Arf2ADP-ribosylation factor 2; GTP-binding protein that functions as an allosteric activator of the cholera toxin catalytic subunit, an ADP-ribosyltransferase. Involved in protein trafficking; may modulate vesicle budding and uncoating within the Golgi apparatus; Belongs to the small GTPase superfamily. Arf family. (181 aa)
Ap4s1AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (144 aa)
Lrrn3Leucine-rich repeat neuronal protein 3. (707 aa)
Pgap4Transmembrane protein 246. (403 aa)
Sh3gl2Endophilin-A1; Implicated in synaptic vesicle endocytosis. May recruit other proteins to membranes with high curvature. Required for BDNF-dependent dendrite outgrowth. Cooperates with SH3GL2 to mediate BDNF-NTRK2 early endocytic trafficking and signaling from early endosomes (By similarity). (352 aa)
Frmd4bFERM domain-containing 4B. (1035 aa)
Dnm2Dynamin-2; Microtubule-associated force-producing protein involved in producing microtubule bundles and able to bind and hydrolyze GTP. Plays a role in the regulation of neuron morphology, axon growth and formation of neuronal growth cones. Plays an important role in vesicular trafficking processes, in particular endocytosis. Involved in cytokinesis. Regulates maturation of apoptotic cell corpse- containing phagosomes by recruiting PIK3C3 to the phagosome membrane (By similarity). Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (870 aa)
Necap2Adaptin ear-binding coat-associated protein 2; Involved in endocytosis; Belongs to the NECAP family. (263 aa)
Mtss1Metastasis suppressor 1 (Predicted), isoform CRA_a. (790 aa)
Necap1Adaptin ear-binding coat-associated protein 1; Involved in endocytosis; Belongs to the NECAP family. (277 aa)
Prag1Inactive tyrosine-protein kinase PRAG1; Catalytically inactive protein kinase that acts as a scaffold protein. Functions as an effector of the small GTPase RND2, which stimulates RhoA activity and inhibits NGF-induced neurite outgrowth. Promotes Src family kinase (SFK) signallig by regulating the subcellular localization of CSK, a negative regulator of these kinases, leading to the regulation of cell morphology and motility by a CSK-dependent mechanism. Acts as a critical coactivator of Notch signaling (By similarity). (1368 aa)
Baiap2l2BAI1-associated protein 2-like 2. (521 aa)
Ap3m1AP-3 complex subunit mu-1; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to lysosomes. In concert with the BLOC-1 complex, AP-3 is required to target cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals (By similarity). (418 aa)
Myo6Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1285 aa)
AmphAmphiphysin; May participate in mechanisms of regulated exocytosis in synapses and certain endocrine cell types. May control the properties of the membrane associated cytoskeleton (By similarity). (681 aa)
Fam193bFamily with sequence similarity 193, member B. (777 aa)
Tom1Target of myb1 membrane-trafficking protein; Belongs to the TOM1 family. (492 aa)
Eps15l1Epidermal growth factor receptor pathway substrate 15-like 1. (909 aa)
Ap5m1AP-5 complex subunit mu-1; As part of AP-5, a probable fifth adaptor protein complex it may be involved in endosomal transport. (490 aa)
CltaClathrin light chain A; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles. Acts as component of the TACC3/ch- TOG/clathrin complex proposed to contribute to stabilization of kinetochore fibers of the mitotic spindle by acting as inter- microtubule bridge (By similarity). (248 aa)
Ap2a1AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (977 aa)
LOC100909548Cation-dependent mannose-6-phosphate receptor; Transport of phosphorylated lysosomal enzymes from the Golgi complex and the cell surface to lysosomes. Lysosomal enzymes bearing phosphomannosyl residues bind specifically to mannose-6-phosphate receptors in the Golgi apparatus and the resulting receptor-ligand complex is transported to an acidic prelyosomal compartment where the low pH mediates the dissociation of the complex (By similarity). (278 aa)
Fcho2F-BAR domain only protein 2; Functions in an early step of clathrin-mediated endocytosis. Has both a membrane binding/bending activity and the ability to recruit proteins essential to the formation of functional clathrin-coated pits. Has a lipid-binding activity with a preference for membranes enriched in phosphatidylserine and phosphoinositides (Pi(4,5) biphosphate) like the plasma membrane. Its membrane-bending activity might be important for the subsequent action of clathrin and adaptors in the formation of clathrin-coated vesicles. Involved in adaptor protein complex AP-2- dependen [...] (809 aa)
Epn1Epsin-1; Binds to membranes enriched in phosphatidylinositol 4,5- bisphosphate (PtdIns(4,5)P2). Modifies membrane curvature and facilitates the formation of clathrin-coated invaginations. Regulates receptor-mediated endocytosis; Belongs to the epsin family. (576 aa)
Ap2s1AP-2 complex subunit sigma; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein Transport via Transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (142 aa)
Igf2rInsulin-like growth factor 2 receptor, isoform CRA_b. (2481 aa)
Rgs19Regulator of G-protein signaling 19; Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds to G-alpha subfamily 1 members, predominantly to G(i)-alpha-3. Activity on G(z)-alpha is inhibited by phosphorylation and palmitoylation of the G-protein (By similarity). (216 aa)
Pstpip2Similar to macrophage actin-associated-tyrosine-phosphorylated protein (Predicted), isoform CRA_a. (334 aa)
Mtss2MTSS I-BAR domain-containing 2. (715 aa)
CltbClathrin light chain B; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (229 aa)
Bin3Bridging integrator 3; Involved in cytokinesis and septation where it has a role in the localization of F-actin. (253 aa)
Arfip2Arfaptin-2; Plays a role in constitutive metalloproteinase (MMP) secretion from the trans Golgi network. May have important functions during vesicle biogenesis at certain cargo subdomains, which could be predominantly utilized by secreted MMPs, such as MMP7 and MMP2. Participates also in autophagy by regulating the starvation-depdendent trafficking of ATG9A vesicles which deliver the PI4-kinase to the autophagosome initiation site. In addition, plays a role in NF-kappa-B inhibition by interacting with IKBKB and IKBKG. (341 aa)
Gga2Golgi associated, gamma adaptin ear containing, ARF binding protein 2, isoform CRA_a. (604 aa)
Ap3m2AP-3 complex subunit mu-2; Component of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. Ap47 is a subunit of the plasma membrane adaptor. In concert with the BLOC-1 complex, AP-3 is required to target cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals (By similarity). (417 aa)
Ap3d1Adaptor-related protein complex 3, delta 1 subunit, isoform CRA_b. (1204 aa)
Ap3b2AP-3 complex subunit beta. (1082 aa)
PsdPH and SEC7 domain-containing protein 1; Guanine nucleotide exchange factor for ARF6 (By similarity). Induces cytoskeletal remodeling (By similarity). (1023 aa)
Fchsd1FCH and double SH3 domains 1 (Predicted), isoform CRA_b. (690 aa)
Ap4b1AP complex subunit beta; Belongs to the adaptor complexes large subunit family. (739 aa)
Sla2Similar to Src-like adaptor protein-2 (Predicted). (263 aa)
Rnd2Rho family GTPase 2, isoform CRA_b. (228 aa)
Cyth2Cytohesin-2; Acts as a guanine-nucleotide exchange factor (GEF). Promotes guanine-nucleotide exchange on ARF1, ARF3 and ARF6. Promotes the activation of ARF factors through replacement of GDP with GTP. The cell membrane form, in association with ARL4 proteins, recruits ARF6 to the plasma membrane (By similarity). Involved in neurite growth (By similarity). (400 aa)
Hip1rHuntingtin-interacting protein 1-related. (1069 aa)
Snap91Clathrin coat assembly protein AP180; Adaptins are components of the adapter complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. Binding of AP180 to clathrin triskelia induces their assembly into 60- 70 nm coats; Belongs to the PICALM/SNAP91 family. (918 aa)
Hip1Huntingtin interacting protein 1, isoform CRA_a. (1030 aa)
Ap5b1AP-5 complex subunit beta-1; As part of AP-5, a probable fifth adaptor protein complex, it may be involved in endosomal transport. (876 aa)
Arhgap20Rho GTPase-activating protein 20; GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state. (1182 aa)
Enthd1ENTH domain-containing 1. (616 aa)
Ap4e1AP-4 complex subunit epsilon; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. (1130 aa)
Arhgap42Rho GTPase-activating protein 42. (826 aa)
Bin2Bridging integrator 2; Promotes cell motility and migration, probably via its interaction with the cell membrane and with podosome proteins that mediate interaction with the cytoskeleton. Modulates membrane curvature and mediates membrane tubulation (By similarity). Plays a role in podosome formation. Inhibits phagocytosis. (507 aa)
RGD1562485Uncharacterized protein. (438 aa)
Olr883Olfactory receptor. (311 aa)
Dnm1Dynamin-1; Microtubule-associated force-producing protein involved in producing microtubule bundles and able to bind and hydrolyze GTP. Most probably involved in vesicular trafficking processes. Involved in receptor-mediated endocytosis (By similarity). (864 aa)
Dab2Disabled homolog 2; Adapter protein that functions as clathrin-associated sorting protein (CLASP) required for clathrin-mediated endocytosis of selected cargo proteins. Can bind and assemble clathrin, and binds simultaneously to phosphatidylinositol 4,5-bisphosphate (PtdIns(4,5)P2) and cargos containing non-phosphorylated NPXY internalization motifs, such as the LDL receptor, to recruit them to clathrin-coated pits. Can function in clathrin-mediated endocytosis independently of the AP-2 complex. Involved in endocytosis of integrin beta-1; this function seems to redundant with the AP-2 [...] (766 aa)
IkWD repeat-containing protein 55; Nucleolar protein that acts as a modulator of rRNA synthesis. Plays a central role during organogenesis (By similarity). Belongs to the WD repeat WDR55 family. (872 aa)
Aak1AP2-associated protein kinase 1; Regulates clathrin-mediated endocytosis by phosphorylating the AP2M1/mu2 subunit of the adaptor protein complex 2 (AP-2) which ensures high affinity binding of AP-2 to cargo membrane proteins during the initial stages of endocytosis. Regulates phosphorylation of other AP-2 subunits as well as AP-2 localization and AP-2-mediated internalization of ligand complexes. Phosphorylates NUMB and regulates its cellular localization, promoting NUMB localization to endosomes. Binds to and stabilizes the activated form of NOTCH1, increases its localization in endos [...] (963 aa)
Itsn1Intersectin-1; Adapter protein that provides a link between the endocytic membrane traffic and the actin assembly machinery. Acts as guanine nucleotide exchange factor (GEF) for CDC42, and thereby stimulates actin nucleation mediated by WASL and the ARP2/3 complex (By similarity). Plays a role in the assembly and maturation of clathrin- coated vesicles. Recruits FCHSD2 to clathrin-coated pits (By similarity). Involved in endocytosis of activated EGFR, and probably also other growth factor receptors (By similarity). Involved in endocytosis of integrin beta-1 (ITGB1) and transferrin rece [...] (1713 aa)
Ica1lIslet cell autoantigen 1-like protein. (474 aa)
Wdr31WD repeat domain 31, isoform CRA_a. (367 aa)
Scn10aSodium channel protein type 10 subunit alpha; Tetrodotoxin-resistant channel that mediates the voltage- dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which sodium ions may pass in accordance with their electrochemical gradient. Plays a role in neuropathic pain mechanisms. Belongs to the sodium channel (TC 1.A.1.10) family. Nav1.8/SCN10A subfamily. (1956 aa)
TollipToll-interacting protein; Component of the signaling pathway of IL-1 and Toll-like receptors. Inhibits cell activation by microbial products. Recruits IRAK1 to the IL-1 receptor complex. Inhibits IRAK1 phosphorylation and kinase activity. Connects the ubiquitin pathway to autophagy by functioning as a ubiquitin-ATG8 family adapter and thus mediating autophagic clearance of ubiquitin conjugates. The TOLLIP-dependent selective autophagy pathway plays an important role in clearance of cytotoxic polyQ proteins aggregates (By similarity). (274 aa)
Fcho1FCH and mu domain-containing endocytic adaptor 1. (560 aa)
Fnbp1Formin-binding protein 1; Required to coordinate membrane tubulation with reorganization of the actin cytoskeleton during the late stage of clathrin-mediated endocytosis. Binds to lipids such as phosphatidylinositol 4,5-bisphosphate and phosphatidylserine and promotes membrane invagination and the formation of tubules. Also enhances actin polymerization via the recruitment of WASL/N-WASP, which in turn activates the Arp2/3 complex. Actin polymerization may promote the fission of membrane tubules to form endocytic vesicles. May be required for the lysosomal retention of FASLG/FASL (By s [...] (632 aa)
LOC102556447Rho guanine nucleotide exchange factor 38-like. (219 aa)
RskrSperm-associated antigen 5. (403 aa)
AftphAftiphilin. (932 aa)
RGD1563104Similar to Vigilin (High density lipoprotein-binding protein) (Predicted). (1250 aa)
Plekhd1Pleckstrin homology domain-containing family D member 1; Belongs to the PLEKHD1 family. (505 aa)
Bmp2kBMP2 inducible kinase. (1062 aa)
Eps15Epidermal growth factor receptor pathway substrate 15. (897 aa)
Gga1Golgi-associated, gamma adaptin ear-containing, ARF-binding protein 1. (562 aa)
Synj2Synaptojanin-2; Inositol 5-phosphatase which may be involved in distinct membrane trafficking and signal transduction pathways. May mediate the inhibitory effect of Rac1 on endocytosis (By similarity). (1495 aa)
Sgip1SH3-containing GRB2-like protein 3-interacting protein 1; May function in clathrin-mediated endocytosis. Has both a membrane binding/tubulating activity and the ability to recruit proteins essential to the formation of functional clathrin-coated pits. Has a preference for membranes enriched in phosphatidylserine and phosphoinositides and is required for the endocytosis of the transferrin receptor. May also bind tubulin. May play a role in the regulation of energy homeostasis. (827 aa)
Pacsin2Protein kinase C and casein kinase substrate in neurons 2 protein; Regulates the morphogenesis and endocytosis of caveolae. Lipid-binding protein that is able to promote the tubulation of the phosphatidic acid-containing membranes it preferentially binds. Plays a role in intracellular vesicle-mediated transport. Involved in the endocytosis of cell-surface receptors like the EGF receptor, contributing to its internalization in the absence of EGF stimulus. (488 aa)
Synj1Synaptojanin-1; Phosphatase that acts on various phosphoinositides, including phosphatidylinositol 4-phosphate, phosphatidylinositol (4,5)- bisphosphate and phosphatidylinositol (3,4,5)-trisphosphate (By similarity). Has a role in clathrin-mediated endocytosis. Hydrolyzes PIP2 bound to actin regulatory proteins resulting in the rearrangement of actin filaments downstream of tyrosine kinase and ASH/GRB2 (By similarity). (1574 aa)
Ap2a2AP-2 complex subunit alpha-2; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold [...] (939 aa)
Ap3s1AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (157 aa)
ArcActivity-regulated cytoskeleton-associated protein; Master regulator of synaptic plasticity that self-assembles into virion-like capsids that encapsulate RNAs and mediate intercellular RNA transfer in the nervous system. ARC protein is released from neurons in extracellular vesicles that mediate the transfer of ARC mRNA into new target cells, where ARC mRNA can undergo activity-dependent translation. ARC capsids are endocytosed and are able to transfer ARC mRNA into the cytoplasm of neurons. Acts as a key regulator of synaptic plasticity: required for protein synthesis-dependent forms [...] (396 aa)
Dnm3Dynamin-3; Microtubule-associated force-producing protein involved in producing microtubule bundles and able to bind and hydrolyze GTP. Most probably involved in vesicular trafficking processes, in particular endocytosis. (869 aa)
DnmbpDynamin-binding protein; Plays a critical role as a guanine nucleotide exchange factor (GEF) for CDC42 in several intracellular processes associated with the actin and microtubule cytoskeleton. Regulates the structure of apical junctions in epithelial cells (By similarity). Participates in the normal lumenogenesis of epithelial cell cysts by regulating spindle orientation (By similarity). Plays a role in ciliogenesis (By similarity). May play a role in membrane trafficking between the cell surface and the Golgi. (1577 aa)
Asap3ArfGAP with SH3 domain, ankyrin repeat and PH domain 3. (903 aa)
Itsn2Intersectin 2. (1716 aa)
Snx9Sorting nexin. (593 aa)
Sh3gl1Endophilin-A2; Implicated in endocytosis. May recruit other proteins to membranes with high curvature (By similarity); Belongs to the endophilin family. (368 aa)
Rnf165Ring finger protein 165. (340 aa)
A0A096MJZ4_RATRho-GAP domain-containing protein. (672 aa)
Gga3ADP-ribosylation factor-binding protein GGA3; Plays a role in protein sorting and trafficking between the trans-Golgi network (TGN) and endosomes. Mediates the ARF-dependent recruitment of clathrin to the TGN and binds ubiquitinated proteins and membrane cargo molecules with a cytosolic acidic cluster-dileucine (DXXLL) motif. Mediates export of the GPCR receptor ADRA2B to the cell surface. Involved in BACE1 transport and sorting as well as regulation of BACE1 protein levels. Regulates retrograde transport of BACE1 from endosomes to the trans-Golgi network via interaction through the VH [...] (727 aa)
Arhgef37Rho guanine nucleotide exchange factor 37; May act as a guanine nucleotide exchange factor (GEF). (676 aa)
Clint1Clathrin interactor 1. (506 aa)
Ap3b1AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1096 aa)
M6prCation-dependent mannose-6-phosphate receptor-like. (278 aa)
Pacsin1Protein kinase C and casein kinase substrate in neurons protein 1; Binds to membranes via its F-BAR domain and mediates membrane tubulation. Plays a role in the reorganization of the microtubule cytoskeleton via its interaction with MAPT; this decreases microtubule stability and inhibits MAPT-induced microtubule polymerization. Plays a role in cellular transport processes by recruiting DNM1, DNM2 and DNM3 to membranes. Plays a role in the reorganization of the actin cytoskeleton and in neuron morphogenesis via its interaction with COBL and WASL, and by recruiting COBL to the cell corte [...] (441 aa)
Ap2m1AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...] (435 aa)
Pacsin3Protein kinase C and casein kinase substrate in neurons 3. (424 aa)
SynrgSynergin gamma; May play a role in endocytosis and/or membrane trafficking at the trans-Golgi network (TGN). May act by linking the adapter protein complex AP-1 to other proteins. (668 aa)
Dnajc6DnaJ heat shock protein family (Hsp40) member C6. (938 aa)
Arfip1Arfaptin-1; Plays a role in controlling biogenesis of secretory granules at the trans-Golgi network. Mechanisitically, binds ARF-GTP at the neck of a growing secretory granule precursor and forms a protective scaffold. Once the granule precursor has been completely loaded, active PRKD1 phosphorylates ARFIP1 and releases it from ARFs. In turn, ARFs induce fission. Through this mechanism, ensures proper secretory granule formation at the Golgi of pancreatic beta cells. (373 aa)
Ap5z1Uncharacterized protein. (545 aa)
LOC103694867ADP-ribosylation factor-binding protein GGA2-like. (468 aa)
Spg11SPG11 vesicle-trafficking-associated, spatacsin. (2465 aa)
Reps1RALBP1-associated Eps domain-containing 1. (744 aa)
Cyth4Similar to cytohesin-4 (Predicted), isoform CRA_a. (394 aa)
A0A0G2K1J7_RATUncharacterized protein. (265 aa)
Reps2RALBP1 associated Eps domain containing protein 2. (574 aa)
Fchsd2FCH and double SH3 domains 2. (762 aa)
Ap2b1AP-2 complex subunit beta; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but [...] (937 aa)
CoblProtein cordon-bleu; Plays an important role in the reorganization of the actin cytoskeleton. Binds to and sequesters actin monomers (G actin). Nucleates actin polymerization by assembling three actin monomers in cross-filament orientation and thereby promotes growth of actin filaments at the barbed end. Can also mediate actin depolymerization at barbed ends and severing of actin filaments. Promotes formation of cell ruffles. Regulates dendrite branching in Purkinje cells (By similarity). Regulates neuron morphogenesis and increases branching of axons and dendrites. (1341 aa)
Ap3s2AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (179 aa)
Arf1ADP-ribosylation factor 1; GTP-binding protein involved in protein trafficking among different compartments. Modulates vesicle budding and uncoating within the Golgi complex. Deactivation induces the redistribution of the entire Golgi complex to the endoplasmic reticulum, suggesting a crucial role in protein trafficking. In its GTP-bound form, its triggers the association with coat proteins with the Golgi membrane. The hydrolysis of ARF1-bound GTP, which is mediated by ARFGAPs proteins, is required for dissociation of coat proteins from Golgi membranes and vesicles. The GTP-bound form [...] (181 aa)
Ap5s1Adaptor-related protein complex 5 subunit sigma 1. (200 aa)
Sh3gl3Endophilin-A3; Implicated in endocytosis. May recruit other proteins to membranes with high curvature. (347 aa)
LOC100910792Uncharacterized protein. (614 aa)
Sh3glb1Endophilin-B1; May be required for normal outer mitochondrial membrane dynamics. Required for coatomer-mediated retrograde transport in certain cells. May recruit other proteins to membranes with high curvature. May promote membrane fusion. Involved in activation of caspase-dependent apoptosis by promoting BAX/BAK1 activation. Involved in caspase-independent apoptosis during nutrition starvation and involved in the regulation of autophagy. Activates lipid kinase activity of PIK3C3 during autophagy probably by associating with the PI3K complex II (PI3KC3-C2). Associated with PI3KC3-C2 d [...] (384 aa)
Zfyve26Zinc finger FYVE domain-containing protein 26; Phosphatidylinositol 3-phosphate-binding protein required for the abcission step in cytokinesis: recruited to the midbody during cytokinesis and acts as a regulator of abcission. May also be required for efficient homologous recombination DNA double-strand break repair (By similarity); Belongs to the ZFYVE26 family. (2542 aa)
Trip10Cdc42-interacting protein 4; Required to coordinate membrane tubulation with reorganization of the actin cytoskeleton during endocytosis. Also acts as a link between CDC42 signaling and regulation of the actin cytoskeleton. Binds to lipids such as phosphatidylinositol 4,5- bisphosphate and phosphatidylserine and promotes membrane invagination and the formation of tubules. Also enhances actin polymerization in the vicinity of membrane tubules by recruiting WASL/N-WASP which in turn activates the Arp2/3 complex. Actin polymerization and dynamin may promote the fission of membrane tubules [...] (600 aa)
Epn2Epsin-2; Plays a role in the formation of clathrin-coated invaginations and endocytosis. (640 aa)
M0RCX5_RATUncharacterized protein. (420 aa)
Sh3glb2Endophilin-B2; Belongs to the endophilin family. (400 aa)
Ica1Islet cell autoantigen 1; May play a role in neurotransmitter secretion. (480 aa)
PicalmPhosphatidylinositol-binding clathrin assembly protein; Cytoplasmic adapter protein that plays a critical role in clathrin-mediated endocytosis which is important in processes such as internalization of cell receptors, synaptic transmission or removal of apoptotic cells. Recruits AP-2 and attaches clathrin triskelions to the cytoplasmic side of plasma membrane leading to clathrin-coated vesicles (CCVs) assembly. Furthermore, regulates clathrin-coated vesicle size and maturation by directly sensing and driving membrane curvature. In addition to binding to clathrin, mediates the endocyto [...] (647 aa)
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
Server load: low (36%) [HD]