node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Brca1 | Pcgf3 | ENSRNOP00000072366 | ENSRNOP00000000071 | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | Polycomb group ring finger 3. | 0.548 |
Brca1 | Pcgf5 | ENSRNOP00000072366 | ENSRNOP00000074710 | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | Polycomb group ring finger 5. | 0.548 |
Cdyl | Suz12 | ENSRNOP00000048651 | ENSRNOP00000072250 | Chromodomain Y-like protein; [Isoform 2]: Chromatin reader protein that recognizes and binds histone H3 trimethylated at 'Lys-9', dimethylated at 'Lys-27' and trimethylated at 'Lys-27' (H3K9me3, H3K27me2 and H3K27me3, respectively). Part of multimeric repressive chromatin complexes, where it is required for transmission and restoration of repressive histone marks, thereby preserving the epigenetic landscape. Required for chromatin targeting and maximal enzymatic activity of Polycomb repressive complex 2 (PRC2); acts as a positive regulator of PRC2 activity by bridging the pre-existing [...] | SUZ12 polycomb repressive complex 2 subunit. | 0.429 |
Exosc10 | Upf1 | ENSRNOP00000014629 | ENSRNOP00000075905 | RCG30986, isoform CRA_a. | UPF1, RNA helicase and ATPase. | 0.434 |
Hnrnpu | Pcgf3 | ENSRNOP00000070912 | ENSRNOP00000000071 | Heterogeneous nuclear ribonucleoprotein U; DNA- and RNA-binding protein involved in several cellular processes such as nuclear chromatin organization, telomere-length regulation, transcription, mRNA alternative splicing and stability, Xist-mediated transcriptional silencing and mitotic cell progression. Plays a role in the regulation of interphase large-scale gene-rich chromatin organization through chromatin-associated RNAs (caRNAs) in a transcription-dependent manner, and thereby maintains genomic stability. Required for the localization of the long non-coding Xist RNA on the inactiv [...] | Polycomb group ring finger 3. | 0.415 |
Hnrnpu | Suz12 | ENSRNOP00000070912 | ENSRNOP00000072250 | Heterogeneous nuclear ribonucleoprotein U; DNA- and RNA-binding protein involved in several cellular processes such as nuclear chromatin organization, telomere-length regulation, transcription, mRNA alternative splicing and stability, Xist-mediated transcriptional silencing and mitotic cell progression. Plays a role in the regulation of interphase large-scale gene-rich chromatin organization through chromatin-associated RNAs (caRNAs) in a transcription-dependent manner, and thereby maintains genomic stability. Required for the localization of the long non-coding Xist RNA on the inactiv [...] | SUZ12 polycomb repressive complex 2 subunit. | 0.484 |
Hnrnpu | Ythdc1 | ENSRNOP00000070912 | ENSRNOP00000002736 | Heterogeneous nuclear ribonucleoprotein U; DNA- and RNA-binding protein involved in several cellular processes such as nuclear chromatin organization, telomere-length regulation, transcription, mRNA alternative splicing and stability, Xist-mediated transcriptional silencing and mitotic cell progression. Plays a role in the regulation of interphase large-scale gene-rich chromatin organization through chromatin-associated RNAs (caRNAs) in a transcription-dependent manner, and thereby maintains genomic stability. Required for the localization of the long non-coding Xist RNA on the inactiv [...] | YTH domain-containing protein 1; Specifically recognizes and binds N6-methyladenosine (m6A)- containing RNAs, and acts as a regulator of alternative splicing. M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in the efficiency of mRNA splicing, processing and stability. Acts as a key regulator of exon-inclusion or exon-skipping during alternative splicing via interaction with mRNA splicing factors SRSF3 and SRSF10 (By similarity). Specifically binds m6A-containing mRNAs and promotes recruitment of SRSF3 to its mRNA-binding elements adjac [...] | 0.400 |
Jarid2 | Pcgf3 | ENSRNOP00000067055 | ENSRNOP00000000071 | Jumonji and AT-rich interaction domain-containing 2. | Polycomb group ring finger 3. | 0.846 |
Jarid2 | Pcgf5 | ENSRNOP00000067055 | ENSRNOP00000074710 | Jumonji and AT-rich interaction domain-containing 2. | Polycomb group ring finger 5. | 0.801 |
Jarid2 | Suz12 | ENSRNOP00000067055 | ENSRNOP00000072250 | Jumonji and AT-rich interaction domain-containing 2. | SUZ12 polycomb repressive complex 2 subunit. | 0.999 |
Lrif1 | Smchd1 | ENSRNOP00000024036 | ENSRNOP00000019359 | Ligand-dependent nuclear receptor-interacting factor 1; Together with SMCHD1, involved in chromosome X inactivation in females by promoting the compaction of heterochromatin. Also able to repress the ligand-induced transcriptional activity of retinoic acid receptor alpha (RARA), possibly through direct recruitment of histone deacetylases; Belongs to the LRIF1 family. | Structural maintenance of chromosomes flexible hinge domain-containing 1. | 0.805 |
Mettl3 | Rbm15 | ENSRNOP00000017720 | ENSRNOP00000064073 | Methyltransferase-like 3, isoform CRA_b; Belongs to the MT-A70-like family. | RNA-binding motif protein 15. | 0.993 |
Mettl3 | Rbm15b | ENSRNOP00000017720 | ENSRNOP00000018994 | Methyltransferase-like 3, isoform CRA_b; Belongs to the MT-A70-like family. | RNA-binding motif protein 15B. | 0.983 |
Mettl3 | Ythdc1 | ENSRNOP00000017720 | ENSRNOP00000002736 | Methyltransferase-like 3, isoform CRA_b; Belongs to the MT-A70-like family. | YTH domain-containing protein 1; Specifically recognizes and binds N6-methyladenosine (m6A)- containing RNAs, and acts as a regulator of alternative splicing. M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in the efficiency of mRNA splicing, processing and stability. Acts as a key regulator of exon-inclusion or exon-skipping during alternative splicing via interaction with mRNA splicing factors SRSF3 and SRSF10 (By similarity). Specifically binds m6A-containing mRNAs and promotes recruitment of SRSF3 to its mRNA-binding elements adjac [...] | 0.821 |
Pcgf3 | Brca1 | ENSRNOP00000000071 | ENSRNOP00000072366 | Polycomb group ring finger 3. | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | 0.548 |
Pcgf3 | Hnrnpu | ENSRNOP00000000071 | ENSRNOP00000070912 | Polycomb group ring finger 3. | Heterogeneous nuclear ribonucleoprotein U; DNA- and RNA-binding protein involved in several cellular processes such as nuclear chromatin organization, telomere-length regulation, transcription, mRNA alternative splicing and stability, Xist-mediated transcriptional silencing and mitotic cell progression. Plays a role in the regulation of interphase large-scale gene-rich chromatin organization through chromatin-associated RNAs (caRNAs) in a transcription-dependent manner, and thereby maintains genomic stability. Required for the localization of the long non-coding Xist RNA on the inactiv [...] | 0.415 |
Pcgf3 | Jarid2 | ENSRNOP00000000071 | ENSRNOP00000067055 | Polycomb group ring finger 3. | Jumonji and AT-rich interaction domain-containing 2. | 0.846 |
Pcgf3 | Pcgf5 | ENSRNOP00000000071 | ENSRNOP00000074710 | Polycomb group ring finger 3. | Polycomb group ring finger 5. | 0.907 |
Pcgf3 | Rlim | ENSRNOP00000000071 | ENSRNOP00000003782 | Polycomb group ring finger 3. | Ring finger protein, LIM domain-interacting. | 0.432 |
Pcgf3 | Suz12 | ENSRNOP00000000071 | ENSRNOP00000072250 | Polycomb group ring finger 3. | SUZ12 polycomb repressive complex 2 subunit. | 0.831 |