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RT1-CE15 | RT1 class I, locus CE11-like; Belongs to the MHC class I family. (353 aa) | ||||
Slc11a1 | Natural resistance-associated macrophage protein 1; Divalent transition metal (iron and manganese) transporter involved in iron metabolism and host resistance to certain pathogens. Macrophage-specific membrane transport function. Controls natural resistance to infection with intracellular parasites. Pathogen resistance involves sequestration of Fe(2+) and Mn(2+), cofactors of both prokaryotic and eukaryotic catalases and superoxide dismutases, not only to protect the macrophage against its own generation of reactive oxygen species, but to deny the cations to the pathogen for synthesis [...] (507 aa) | ||||
Relb | RELB proto-oncogene, NF-kB subunit. (558 aa) | ||||
Fcgr2b | Low affinity immunoglobulin gamma Fc region receptor II; Binds to the Fc region of immunoglobulins gamma. Low affinity receptor. By binding to IgG it initiates cellular responses against pathogens and soluble antigens. (342 aa) | ||||
RT1-CE5 | RT1 class I, locus CE5; Belongs to the MHC class I family. (375 aa) | ||||
RT1-CE7 | RT1 class I, locus CE7; Belongs to the MHC class I family. (355 aa) | ||||
Rab5b | RAB5B, member RAS oncogene family (Predicted), isoform CRA_c. (215 aa) | ||||
RT1-CE4 | RT1 class I, locus CE4; Belongs to the MHC class I family. (373 aa) | ||||
Gba | Glucosylceramidase. (515 aa) | ||||
Rab10 | Ras-related protein Rab-10; The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes (By similarity). Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different set of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion (By similarity). That Rab is mainly involved in the biosynthetic transport of proteins from the Golgi to the plasma membrane (By similarity). Regulates, for instance, SLC [...] (200 aa) | ||||
M0R866_RAT | Ig-like domain-containing protein; Belongs to the MHC class I family. (245 aa) | ||||
RT1-DMb | Major histocompatibility complex, class II, DM beta, isoform CRA_a. (261 aa) | ||||
LOC100909630 | RT1 class II, locus DMb. (261 aa) | ||||
RT1-DMa | Major histocompatibility complex, class II, DM alpha; Belongs to the MHC class II family. (260 aa) | ||||
LOC100909593 | RT1 class II, locus DMa. (260 aa) | ||||
LOC103689996 | Antigen peptide transporter 2. (703 aa) | ||||
Rab27a | Ras-related protein Rab-27A; Small GTPase which cycles between active GTP-bound and inactive GDP-bound states. In its active state, binds to a variety of effector proteins to regulate homeostasis of late endocytic pathway, including endosomal positioning, maturation and secretion. Plays a role in cytotoxic granule exocytosis in lymphocytes. Required for both granule maturation and granule docking and priming at the immunologic synapse. (221 aa) | ||||
Flt3 | Fms-related tyrosine kinase 3; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1002 aa) | ||||
Ap3b1 | AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1096 aa) | ||||
Arl8b | ADP-ribosylation factor-like protein 8B; Plays a role in lysosome motility (By similarity). In neurons, mediates the anterograde axonal long-range transport of presynaptic lysosome-related vesicles required for presynaptic biogenesis and synaptic function (By similarity). May play a role in chromosome segregation (By similarity). (186 aa) | ||||
RT1-M6-1 | RT1 class I, locus M6, gene 1; Belongs to the MHC class I family. (372 aa) | ||||
RT1-A | RT1 class Ia, locus A1; Belongs to the MHC class I family. (382 aa) | ||||
Fcgr1a | Fc fragment of IgG receptor Ia. (362 aa) | ||||
Washc1 | WASH complex subunit 1; Acts as a nucleation-promoting factor at the surface of endosomes, where it recruits and activates the Arp2/3 complex to induce actin polymerization, playing a key role in the fission of tubules that serve as transport intermediates during endosome sorting. Its assembly in the WASH core complex seems to inhibit its NPF activity and via WASHC2 is required for its membrane targeting. Regulates the trafficking of endosomal alpha5beta1 integrin to the plasma membrane and involved in invasive cell migration. In T-cells involved in endosome-to-membrane recycling of re [...] (442 aa) | ||||
Kdm5d | Lysine demethylase 5D. (1550 aa) | ||||
Rab34 | Ras-related protein Rab-34; Protein transport. Plays a role in the maturation of phagosomes that engulf pathogens, such as S.aureus and Mycobacterium. Plays a role in the fusion of phagosomes with lysosomes. Involved in the redistribution of lysosomes to the peri-Golgi region. Acts also as a positive regulator of hedgehog signaling and regulates ciliary function. (258 aa) | ||||
RT1-T24-3 | RT1 class I, locus T24, gene 3; Belongs to the MHC class I family. (316 aa) | ||||
LOC100909797 | Ig-like domain-containing protein; Belongs to the MHC class I family. (299 aa) | ||||
Atg5 | Autophagy protein 5; Involved in autophagic vesicle formation. Conjugation with ATG12, through a ubiquitin-like conjugating system involving ATG7 as an E1-like activating enzyme and ATG10 as an E2-like conjugating enzyme, is essential for its function. The ATG12-ATG5 conjugate acts as an E3- like enzyme which is required for lipidation of ATG8 family proteins and their association to the vesicle membranes. Involved in mitochondrial quality control after oxidative damage, and in subsequent cellular longevity. Plays a critical role in multiple aspects of lymphocyte development and is ess [...] (245 aa) | ||||
RT1-M3-1 | RT1 class Ib, locus M3, isoform CRA_a; Belongs to the MHC class I family. (339 aa) | ||||
Psap | Saposin-B-Val; [Prosaposin]: Behaves as a myelinotrophic and neurotrophic factor, these effects are mediated by its G-protein-coupled receptors, GPR37 and GPR37L1, undergoing ligand-mediated internalization followed by ERK phosphorylation signaling. Saposin-B stimulates the hydrolysis of galacto-cerebroside sulfate by arylsulfatase A (EC 3.1.6.8), GM1 gangliosides by beta- galactosidase (EC 3.2.1.23) and globotriaosylceramide by alpha- galactosidase A (EC 3.2.1.22). Saposin-B forms a solubilizing complex with the substrates of the sphingolipid hydrolases. Saposins are specific low-mol [...] (557 aa) | ||||
Psmb9 | Proteasome subunit beta type-9; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity. This subunit is involved in antigen processing to generate class I binding peptides. (219 aa) | ||||
Tap1 | Antigen peptide transporter 1; Involved in the transport of antigens from the cytoplasm to the endoplasmic reticulum for association with MHC class I molecules. Also acts as a molecular scaffold for the final stage of MHC class I folding, namely the binding of peptide. Nascent MHC class I molecules associate with TAP via tapasin (By similarity). (725 aa) | ||||
Psmb8 | Proteasome subunit beta type-8; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity. This subunit is involved in antigen processing to generate class I binding peptides. May participate in the generation of spliced peptides resulting from the ligation of two separate proteasomal cleavage products that are not contiguous in the parental protein (By similarity). Required for adip [...] (276 aa) | ||||
Tap2 | Antigen peptide transporter 2; Involved in the transport of antigens from the cytoplasm to the endoplasmic reticulum for association with MHC class I molecules. Also acts as a molecular scaffold for the final stage of MHC class I folding, namely the binding of peptide. Nascent MHC class I molecules associate with TAP via tapasin (By similarity). (703 aa) | ||||
RT1-DOb | RT1 class II, locus DOb. (272 aa) | ||||
RT1-Bb | Rano class II histocompatibility antigen, B-1 beta chain; Involved in the presentation of foreign antigens to the immune system; Belongs to the MHC class II family. (263 aa) | ||||
RT1-Ba | Rano class II histocompatibility antigen, B alpha chain. (255 aa) | ||||
RT1-Db1 | Rano class II histocompatibility antigen, D-1 beta chain; Involved in the presentation of foreign antigens to the immune system; Belongs to the MHC class II family. (264 aa) | ||||
Ifng | Interferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons; Belongs to the type II (or gamma) interferon family. (156 aa) | ||||
Rab33a | RAB33A, member of RAS oncogene family (Predicted). (237 aa) | ||||
Traf6 | TNF receptor-associated factor 6; E3 ubiquitin ligase that, together with UBE2N and UBE2V1, mediates the synthesis of 'Lys-63'-linked-polyubiquitin chains conjugated to proteins, such as IKBKG, IRAK1, AKT1 and AKT2. Also mediates ubiquitination of free/unanchored polyubiquitin chain that leads to MAP3K7 activation. Mediates activation of NF-kappa-B and JUN. May be essential for the formation of functional osteoclasts. Seems to also play a role in dendritic cells (DCs) maturation and/or activation. Represses c-Myb-mediated transactivation, in B-lymphocytes. Adapter protein that seems to [...] (530 aa) | ||||
Mr1 | Major histocompatibility complex class I-related gene protein; Antigen-presenting molecule specialized in presenting microbial vitamin B metabolites. Involved in the development and expansion of a small population of T-cells expressing an invariant T- cell receptor alpha chain called mucosal-associated invariant T-cells (MAIT). MAIT lymphocytes are preferentially located in the gut lamina propria and therefore may be involved in monitoring commensal flora or serve as a distress signal. Expression and MAIT cell recognition seem to be ligand-dependent (By similarity). (353 aa) | ||||
Fcgr2a | Low affinity immunoglobulin gamma Fc region receptor III; Receptor for the Fc region of complexed immunoglobulins gamma. Low affinity receptor which binds to IgG1, IgG2a and IgG2b (By similarity). Mediates neutrophil activation by IgG complexes redundantly with Fcgr4 (By similarity). (267 aa) | ||||
Calr | Calreticulin; Calcium-binding chaperone that promotes folding, oligomeric assembly and quality control in the endoplasmic reticulum (ER) via the calreticulin/calnexin cycle. This lectin interacts transiently with almost all of the monoglucosylated glycoproteins that are synthesized in the ER. Interacts with the DNA-binding domain of NR3C1 and mediates its nuclear export. Involved in maternal gene expression regulation. May participate in oocyte maturation via the regulation of calcium homeostasis. (416 aa) | ||||
Azgp1 | Zinc-alpha-2-glycoprotein; Stimulates lipid degradation in adipocytes and causes the extensive fat losses associated with some advanced cancers. Belongs to the MHC class I family. (296 aa) | ||||
RT1-S3 | RT1 class Ib, locus S3; Belongs to the MHC class I family. (365 aa) | ||||
RT1-N3 | RT1 class Ib gene, H2-TL-like, grc region (N3); Belongs to the MHC class I family. (393 aa) | ||||
Rab3b | Ras-related protein Rab-3B; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family. (219 aa) | ||||
Clec4a3 | C-type lectin domain family 4, member A3. (237 aa) | ||||
Erap1 | Endoplasmic reticulum aminopeptidase 1; Aminopeptidase that plays a central role in peptide trimming, a step required for the generation of most HLA class I-binding peptides. Peptide trimming is essential to customize longer precursor peptides to fit them to the correct length required for presentation on MHC class I molecules. Strongly prefers substrates 9-16 residues long. Rapidly degrades 13-mer to a 9-mer and then stops. Preferentially hydrolyzes the residue Leu and peptides with a hydrophobic C-terminus, while it has weak activity toward peptides with charged C-terminus. May play [...] (930 aa) | ||||
Rftn1 | Similar to RIKEN cDNA 2310015N21 (Predicted). (554 aa) | ||||
Rab3c | Ras-related protein Rab-3C; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family. (227 aa) | ||||
Marchf8 | Membrane-associated ring finger (C3HC4) 8 (Predicted). (286 aa) | ||||
Pikfyve | Phosphoinositide kinase, FYVE-type zinc finger-containing. (2109 aa) | ||||
Pdia3 | Protein disulfide-isomerase A3. (510 aa) | ||||
Cd1d1 | Antigen-presenting glycoprotein CD1d; Antigen-presenting protein that binds self and non-self glycolipids and presents them to T-cell receptors on natural killer T- cells. (336 aa) | ||||
B2m | Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system. (119 aa) | ||||
Ide | Insulin-degrading enzyme; Plays a role in the cellular breakdown of insulin, APP peptides, IAPP peptides, glucagon, bradykinin, kallidin and other peptides, and thereby plays a role in intercellular peptide signaling. Substrate binding induces important conformation changes, making it possible to bind and degrade larger substrates, such as insulin (By similarity). Contributes to the regulation of peptide hormone signaling cascades and regulation of blood glucose homeostasis via its role in the degradation of insulin, glucagon and IAPP (By similarity). Plays a role in the degradation an [...] (1019 aa) | ||||
Unc93b1 | Unc-93 homolog B1, TLR-signaling regulator. (630 aa) | ||||
Rab8b | Ras-related protein Rab-8B; The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different sets of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion. That Rab may be involved in polarized vesicular trafficking and neurotransmitter release. May participate in cell junction dynamics in Sertoli cells. (207 aa) | ||||
Rab6a | Ras-related protein Rab-6A; Protein transport. Regulator of membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER). Involved in COPI-independent retrograde transport from the Golgi to the ER. Belongs to the small GTPase superfamily. Rab family. (208 aa) | ||||
Cd74 | H-2 class II histocompatibility antigen gamma chain; Plays a critical role in MHC class II antigen processing by stabilizing peptide-free class II alpha/beta heterodimers in a complex soon after their synthesis and directing transport of the complex from the endoplasmic reticulum to compartments where peptide loading of class II takes place. Enhance also the stimulation of T-cell responses through interaction with CD44. (280 aa) | ||||
Ctsl | Cathepsin L1 heavy chain; Thiol protease important for the overall degradation of proteins in lysosomes (Probable). Involved in the solubilization of cross-linked TG/thyroglobulin and in the subsequent release of thyroid hormone thyroxine (T4) by limited proteolysis of TG/thyroglobulin in the thyroid follicle lumen (By similarity). Belongs to the peptidase C1 family. (334 aa) | ||||
Ap3d1 | Adaptor-related protein complex 3, delta 1 subunit, isoform CRA_b. (1204 aa) | ||||
Psme1 | Proteasome activator complex subunit 1; Implicated in immunoproteasome assembly and required for efficient antigen processing. The PA28 activator complex enhances the generation of class I binding peptides by altering the cleavage pattern of the proteasome. (249 aa) | ||||
Ifi30 | Gamma-interferon-inducible lysosomal thiol reductase; Lysosomal thiol reductase that can reduce protein disulfide bonds. May facilitate the complete unfolding of proteins destined for lysosomal degradation. Plays an important role in antigen processing. Facilitates the generation of MHC class II-restricted epitodes from disulfide bond-containing antigen by the endocytic reduction of disulfide bonds. Facilitates also MHC class I-restricted recognition of exogenous antigens containing disulfide bonds by CD8+ T-cells or crosspresentation (By similarity); Belongs to the GILT family. (248 aa) | ||||
Psme2 | Proteasome activator complex subunit 2; Implicated in immunoproteasome assembly and required for efficient antigen processing. The PA28 activator complex enhances the generation of class I binding peptides by altering the cleavage pattern of the proteasome. (238 aa) | ||||
Icam1 | Intercellular adhesion molecule 1; ICAM proteins are ligands for the leukocyte adhesion protein LFA-1 (integrin alpha-L/beta-2). During leukocyte trans-endothelial migration, ICAM1 engagement promotes the assembly of endothelial apical cups through ARHGEF26/SGEF and RHOG activation (By similarity). Belongs to the immunoglobulin superfamily. ICAM family. (545 aa) | ||||
Ctss | Cathepsin S; Thiol protease. Key protease responsible for the removal of the invariant chain from MHC class II molecules. The bond-specificity of this proteinase is in part similar to the specificities of cathepsin L (By similarity). May be involved in thyroid hormone biosynthesis. Belongs to the peptidase C1 family. (329 aa) | ||||
Rab35 | Ras-related protein Rab-35; The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different sets of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion. That Rab is involved in the process of endocytosis and is an essential rate-limiting regulator of the fast recycling pathway back to the plasma membrane. During cytokinesis, required f [...] (201 aa) | ||||
Ext1 | Exostosin glycosyltransferase 1; Belongs to the glycosyltransferase 47 family. (746 aa) | ||||
RT1-Ha | RT1 class II, locus Ha; Belongs to the MHC class II family. (216 aa) | ||||
RT1-DOa | RT1 class II, locus DOa; Belongs to the MHC class II family. (250 aa) | ||||
Trex1 | Three prime repair exonuclease 1. (316 aa) | ||||
Fcer1g | High affinity immunoglobulin epsilon receptor subunit gamma; Adapter protein containing an immunoreceptor tyrosine-based activation motif (ITAM) that transduces activation signals from various immunoreceptors. As a component of the high-affinity immunoglobulin E (IgE) receptor, mediates allergic inflammatory signaling in mast cells. As a constitutive component of interleukin-3 receptor complex, selectively mediates interleukin 4/IL4 production by basophils priming T-cells toward effector T-helper 2 subset. Associates with pattern recognition receptors CLEC4D and CLEC4E to form a functi [...] (86 aa) | ||||
Mfsd6 | Similar to expressed sequence AW212394 (Predicted). (794 aa) | ||||
Clec4a | C-type lectin domain family 4 member A; C-type lectin receptor that binds carbohydrates mannose and fucose but also weakly interacts with N-acetylglucosamine (GlcNAc) in a Ca(2+)-dependent manner. Involved in regulating immune reactivity. Once triggered by antigen, it is internalized by clathrin-dependent endocytosis and delivers its antigenic cargo into the antigen presentation pathway resulting in cross-priming of CD8(+) T cells. This cross-presentation and cross-priming are enhanced by TLR7 and TLR8 agonists with increased expansion of the CD8(+) T cells, high production of IFNG and [...] (240 aa) | ||||
Marchf1 | Membrane associated ring-CH-type finger 1. (254 aa) | ||||
RT1-CE10 | RT1 class I, locus CE10; Belongs to the MHC class I family. (367 aa) | ||||
RT1-CE1 | RT1 class I, locus1; Belongs to the MHC class I family. (375 aa) | ||||
RT1-S2 | RT1 class Ib, locus S2. (176 aa) | ||||
Wdfy4 | WDFY family member 4. (3187 aa) | ||||
RT1-Db2 | MHC class II beta chain. (287 aa) | ||||
Fcgr3a | Fc of IgG, low affinity IIIa, receptor. (249 aa) | ||||
RT1-T24-4 | Histocompatibility 2, T region locus 24; Belongs to the MHC class I family. (373 aa) | ||||
RT1-M2 | RT1 class Ib, locus M2; Belongs to the MHC class I family. (344 aa) | ||||
Tapbp | Tap-binding protein (Tapasin). (464 aa) | ||||
RT1-M5 | RT1 class Ib, locus M5; Belongs to the MHC class I family. (357 aa) | ||||
RT1-M6-2 | RT1 class I, locus M6, gene 2; Belongs to the MHC class I family. (332 aa) | ||||
Ctse | Cathepsin E; May have a role in immune function. Probably involved in the processing of antigenic peptides during MHC class II-mediated antigen presentation. May play a role in activation-induced lymphocyte depletion in the thymus, and in neuronal degeneration and glial cell activation in the brain (By similarity). (398 aa) | ||||
RT1-Da | Histocompatibility 2, class II antigen E alpha; Belongs to the MHC class II family. (255 aa) | ||||
Rab4a | Ras-related protein Rab-4A; Protein transport. Plays a role in vesicular traffic. Mediates VEGFR2 endosomal trafficking to enhance VEGFR2 signaling. (218 aa) | ||||
RT1-CE3 | RT1 class I, locus CE3; Belongs to the MHC class I family. (352 aa) | ||||
RT1-N2 | RCG41803, isoform CRA_a; Belongs to the MHC class I family. (377 aa) | ||||
RT1-T24-1 | RT1 class I, locus T24, gene 1; Belongs to the MHC class I family. (330 aa) | ||||
Treml4 | Ig-like domain-containing protein. (247 aa) | ||||
RT1-A2 | RT1 class I histocompatibility antigen, AA alpha chain; Involved in the presentation of foreign antigens to the immune system. (366 aa) | ||||
Abcb9 | ATP-binding cassette sub-family B member 9; ATP-dependent low-affinity peptide transporter which translocates a broad spectrum of peptides from the cytosol to the lysosomal lumen. Displays a broad peptide length specificity from 6-mer up to at least 59-mer peptides with an optimum of 23-mers. Favors positively charged, aromatic or hydrophobic residues in the N- and C- terminal positions whereas negatively charged residues as well as asparagine and methionine are not favored (By similarity). Belongs to the ABC transporter superfamily. ABCB family. MHC peptide exporter (TC 3.A.1.209) sub [...] (762 aa) |