Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Atxn2 | Atxn2l | ENSRNOP00000001691 | ENSRNOP00000070616 | Ataxin 2. | Ataxin 2-like. | 0.919 |
| Atxn2 | Ddx6 | ENSRNOP00000001691 | ENSRNOP00000073900 | Ataxin 2. | DEAD-box helicase 6; Belongs to the DEAD box helicase family. | 0.913 |
| Atxn2 | Eif2s1 | ENSRNOP00000001691 | ENSRNOP00000013375 | Ataxin 2. | Eukaryotic translation initiation factor 2 subunit 1; Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S pre- initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF- 2 must exchange with GTP by way of a reaction catalyzed [...] | 0.435 |
| Atxn2 | G3bp1 | ENSRNOP00000001691 | ENSRNOP00000018149 | Ataxin 2. | G3BP stress granule assembly factor 1. | 0.854 |
| Atxn2 | G3bp2 | ENSRNOP00000001691 | ENSRNOP00000003346 | Ataxin 2. | Similar to RNA-binding protein isoform G3BP-2a, isoform CRA_b. | 0.496 |
| Atxn2 | Ogfod1 | ENSRNOP00000001691 | ENSRNOP00000026118 | Ataxin 2. | 2-oxoglutarate and iron-dependent oxygenase domain-containing 1. | 0.465 |
| Atxn2 | RGD1359108 | ENSRNOP00000001691 | ENSRNOP00000013181 | Ataxin 2. | Guanine nucleotide exchange C9orf72 homolog; Component of the C9orf72-SMCR8 complex, a complex that has guanine nucleotide exchange factor (GEF) activity and regulates autophagy. In the complex, C9orf72 and SMCR8 probably constitute the catalytic subunits that promote the exchange of GDP to GTP, converting inactive GDP-bound RAB8A and RAB39B into their active GTP-bound form, thereby promoting autophagosome maturation. The C9orf72-SMCR8 complex also acts as a regulator of autophagy initiation by interacting with the ATG1/ULK1 kinase complex and modulating its protein kinase activity. Po [...] | 0.683 |
| Atxn2 | Tia1 | ENSRNOP00000001691 | ENSRNOP00000023102 | Ataxin 2. | TIA1 cytotoxic granule-associated RNA-binding protein. | 0.865 |
| Atxn2l | Atxn2 | ENSRNOP00000070616 | ENSRNOP00000001691 | Ataxin 2-like. | Ataxin 2. | 0.919 |
| Atxn2l | Ddx6 | ENSRNOP00000070616 | ENSRNOP00000073900 | Ataxin 2-like. | DEAD-box helicase 6; Belongs to the DEAD box helicase family. | 0.829 |
| Atxn2l | G3bp1 | ENSRNOP00000070616 | ENSRNOP00000018149 | Ataxin 2-like. | G3BP stress granule assembly factor 1. | 0.523 |
| Atxn2l | G3bp2 | ENSRNOP00000070616 | ENSRNOP00000003346 | Ataxin 2-like. | Similar to RNA-binding protein isoform G3BP-2a, isoform CRA_b. | 0.637 |
| Bicd1 | Dync1h1 | ENSRNOP00000052303 | ENSRNOP00000066312 | Bicaudal D homolog 1 (Drosophila) (Predicted). | Cytoplasmic dynein 1 heavy chain 1; Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Plays a role in mitotic spindle assembly and metaphase plate congression; Belongs to the dynein heavy chain family. | 0.884 |
| Cirbp | Lsm14a | ENSRNOP00000021648 | ENSRNOP00000030800 | Cold-inducible RNA-binding protein; Cold-inducible mRNA binding protein that plays a protective role in the genotoxic stress response by stabilizing transcripts of genes involved in cell survival. Acts as a translational activator. Seems to play an essential role in cold-induced suppression of cell proliferation. Binds specifically to the 3'-untranslated regions (3'- UTRs) of stress-responsive transcripts RPA2 and TXN. Acts as a translational repressor. Promotes assembly of stress granules (SGs), when overexpressed (By similarity). | LSM14A mRNA-processing body assembly factor. | 0.424 |
| Csde1 | G3bp1 | ENSRNOP00000069264 | ENSRNOP00000018149 | Cold shock domain-containing protein E1; RNA-binding protein. May be involved in translationally coupled mRNA turnover. Implicated with other RNA-binding proteins in the cytoplasmic deadenylation/translational and decay interplay of the FOS mRNA mediated by the major coding-region determinant of instability (mCRD) domain (By similarity). | G3BP stress granule assembly factor 1. | 0.486 |
| Csde1 | Pum2 | ENSRNOP00000069264 | ENSRNOP00000008359 | Cold shock domain-containing protein E1; RNA-binding protein. May be involved in translationally coupled mRNA turnover. Implicated with other RNA-binding proteins in the cytoplasmic deadenylation/translational and decay interplay of the FOS mRNA mediated by the major coding-region determinant of instability (mCRD) domain (By similarity). | Pumilio RNA-binding family member 2. | 0.432 |
| Csde1 | Ubap2l | ENSRNOP00000069264 | ENSRNOP00000024364 | Cold shock domain-containing protein E1; RNA-binding protein. May be involved in translationally coupled mRNA turnover. Implicated with other RNA-binding proteins in the cytoplasmic deadenylation/translational and decay interplay of the FOS mRNA mediated by the major coding-region determinant of instability (mCRD) domain (By similarity). | Ubiquitin-associated protein 2-like. | 0.523 |
| Ddx3x | Ddx6 | ENSRNOP00000074025 | ENSRNOP00000073900 | DEAD-box helicase 3, X-linked; Belongs to the DEAD box helicase family. | DEAD-box helicase 6; Belongs to the DEAD box helicase family. | 0.656 |
| Ddx3x | Eif2s1 | ENSRNOP00000074025 | ENSRNOP00000013375 | DEAD-box helicase 3, X-linked; Belongs to the DEAD box helicase family. | Eukaryotic translation initiation factor 2 subunit 1; Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S pre- initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF- 2 must exchange with GTP by way of a reaction catalyzed [...] | 0.422 |
| Ddx3x | G3bp1 | ENSRNOP00000074025 | ENSRNOP00000018149 | DEAD-box helicase 3, X-linked; Belongs to the DEAD box helicase family. | G3BP stress granule assembly factor 1. | 0.594 |
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