Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Plxna1 | Plxna2 | ENSRNOP00000022951 | ENSRNOP00000009900 | Plexin A1. | Plexin A2. | 0.712 |
| Plxna1 | Plxna3 | ENSRNOP00000022951 | ENSRNOP00000068735 | Plexin A1. | Plexin-A3; Coreceptor for SEMA3A and SEMA3F. Necessary for signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton. Plays a role in axon guidance in the developing nervous system. Regulates the migration of sympathetic neurons, but not of neural crest precursors. Required for normal dendrite spine morphology in pyramidal neurons. May play a role in regulating semaphorin-mediated programmed cell death in the developing nervous system. Class 3 semaphorins bind to a complex composed of a neuropilin and a plexin. The plexin modulates the affinity of the complex for s [...] | 0.656 |
| Plxna1 | Plxna4 | ENSRNOP00000022951 | ENSRNOP00000017537 | Plexin A1. | Plexin A4. | 0.920 |
| Plxna1 | Plxnb1 | ENSRNOP00000022951 | ENSRNOP00000048230 | Plexin A1. | Plexin B1. | 0.712 |
| Plxna1 | Plxnb3 | ENSRNOP00000022951 | ENSRNOP00000072671 | Plexin A1. | Plexin-B3; Receptor for SEMA5A that plays a role in axon guidance, invasive growth and cell migration. Stimulates neurite outgrowth and mediates Ca(2+)/Mg(2+)-dependent cell aggregation. In glioma cells, SEMA5A stimulation of PLXNB3 results in the disassembly of F-actin stress fibers, disruption of focal adhesions and cellular collapse as well as inhibition of cell migration and invasion through ARHGDIA- mediated inactivation of RAC1; Belongs to the plexin family. | 0.602 |
| Plxna1 | Plxnd1 | ENSRNOP00000022951 | ENSRNOP00000033101 | Plexin A1. | Plexin D1 (Predicted). | 0.759 |
| Plxna2 | Plxna1 | ENSRNOP00000009900 | ENSRNOP00000022951 | Plexin A2. | Plexin A1. | 0.712 |
| Plxna2 | Plxna3 | ENSRNOP00000009900 | ENSRNOP00000068735 | Plexin A2. | Plexin-A3; Coreceptor for SEMA3A and SEMA3F. Necessary for signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton. Plays a role in axon guidance in the developing nervous system. Regulates the migration of sympathetic neurons, but not of neural crest precursors. Required for normal dendrite spine morphology in pyramidal neurons. May play a role in regulating semaphorin-mediated programmed cell death in the developing nervous system. Class 3 semaphorins bind to a complex composed of a neuropilin and a plexin. The plexin modulates the affinity of the complex for s [...] | 0.564 |
| Plxna2 | Plxna4 | ENSRNOP00000009900 | ENSRNOP00000017537 | Plexin A2. | Plexin A4. | 0.570 |
| Plxna2 | Plxnb1 | ENSRNOP00000009900 | ENSRNOP00000048230 | Plexin A2. | Plexin B1. | 0.615 |
| Plxna2 | Plxnb3 | ENSRNOP00000009900 | ENSRNOP00000072671 | Plexin A2. | Plexin-B3; Receptor for SEMA5A that plays a role in axon guidance, invasive growth and cell migration. Stimulates neurite outgrowth and mediates Ca(2+)/Mg(2+)-dependent cell aggregation. In glioma cells, SEMA5A stimulation of PLXNB3 results in the disassembly of F-actin stress fibers, disruption of focal adhesions and cellular collapse as well as inhibition of cell migration and invasion through ARHGDIA- mediated inactivation of RAC1; Belongs to the plexin family. | 0.599 |
| Plxna2 | Plxnd1 | ENSRNOP00000009900 | ENSRNOP00000033101 | Plexin A2. | Plexin D1 (Predicted). | 0.619 |
| Plxna3 | Plxna1 | ENSRNOP00000068735 | ENSRNOP00000022951 | Plexin-A3; Coreceptor for SEMA3A and SEMA3F. Necessary for signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton. Plays a role in axon guidance in the developing nervous system. Regulates the migration of sympathetic neurons, but not of neural crest precursors. Required for normal dendrite spine morphology in pyramidal neurons. May play a role in regulating semaphorin-mediated programmed cell death in the developing nervous system. Class 3 semaphorins bind to a complex composed of a neuropilin and a plexin. The plexin modulates the affinity of the complex for s [...] | Plexin A1. | 0.656 |
| Plxna3 | Plxna2 | ENSRNOP00000068735 | ENSRNOP00000009900 | Plexin-A3; Coreceptor for SEMA3A and SEMA3F. Necessary for signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton. Plays a role in axon guidance in the developing nervous system. Regulates the migration of sympathetic neurons, but not of neural crest precursors. Required for normal dendrite spine morphology in pyramidal neurons. May play a role in regulating semaphorin-mediated programmed cell death in the developing nervous system. Class 3 semaphorins bind to a complex composed of a neuropilin and a plexin. The plexin modulates the affinity of the complex for s [...] | Plexin A2. | 0.564 |
| Plxna3 | Plxna4 | ENSRNOP00000068735 | ENSRNOP00000017537 | Plexin-A3; Coreceptor for SEMA3A and SEMA3F. Necessary for signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton. Plays a role in axon guidance in the developing nervous system. Regulates the migration of sympathetic neurons, but not of neural crest precursors. Required for normal dendrite spine morphology in pyramidal neurons. May play a role in regulating semaphorin-mediated programmed cell death in the developing nervous system. Class 3 semaphorins bind to a complex composed of a neuropilin and a plexin. The plexin modulates the affinity of the complex for s [...] | Plexin A4. | 0.649 |
| Plxna3 | Plxnb1 | ENSRNOP00000068735 | ENSRNOP00000048230 | Plexin-A3; Coreceptor for SEMA3A and SEMA3F. Necessary for signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton. Plays a role in axon guidance in the developing nervous system. Regulates the migration of sympathetic neurons, but not of neural crest precursors. Required for normal dendrite spine morphology in pyramidal neurons. May play a role in regulating semaphorin-mediated programmed cell death in the developing nervous system. Class 3 semaphorins bind to a complex composed of a neuropilin and a plexin. The plexin modulates the affinity of the complex for s [...] | Plexin B1. | 0.660 |
| Plxna3 | Plxnb3 | ENSRNOP00000068735 | ENSRNOP00000072671 | Plexin-A3; Coreceptor for SEMA3A and SEMA3F. Necessary for signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton. Plays a role in axon guidance in the developing nervous system. Regulates the migration of sympathetic neurons, but not of neural crest precursors. Required for normal dendrite spine morphology in pyramidal neurons. May play a role in regulating semaphorin-mediated programmed cell death in the developing nervous system. Class 3 semaphorins bind to a complex composed of a neuropilin and a plexin. The plexin modulates the affinity of the complex for s [...] | Plexin-B3; Receptor for SEMA5A that plays a role in axon guidance, invasive growth and cell migration. Stimulates neurite outgrowth and mediates Ca(2+)/Mg(2+)-dependent cell aggregation. In glioma cells, SEMA5A stimulation of PLXNB3 results in the disassembly of F-actin stress fibers, disruption of focal adhesions and cellular collapse as well as inhibition of cell migration and invasion through ARHGDIA- mediated inactivation of RAC1; Belongs to the plexin family. | 0.626 |
| Plxna3 | Plxnd1 | ENSRNOP00000068735 | ENSRNOP00000033101 | Plexin-A3; Coreceptor for SEMA3A and SEMA3F. Necessary for signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton. Plays a role in axon guidance in the developing nervous system. Regulates the migration of sympathetic neurons, but not of neural crest precursors. Required for normal dendrite spine morphology in pyramidal neurons. May play a role in regulating semaphorin-mediated programmed cell death in the developing nervous system. Class 3 semaphorins bind to a complex composed of a neuropilin and a plexin. The plexin modulates the affinity of the complex for s [...] | Plexin D1 (Predicted). | 0.693 |
| Plxna4 | Plxna1 | ENSRNOP00000017537 | ENSRNOP00000022951 | Plexin A4. | Plexin A1. | 0.920 |
| Plxna4 | Plxna2 | ENSRNOP00000017537 | ENSRNOP00000009900 | Plexin A4. | Plexin A2. | 0.570 |
page 1 of 3