Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Bcl11b | Cux1 | ENSRNOP00000007602 | ENSRNOP00000056243 | BAF chromatin-remodeling complex subunit BCL11B. | Homeobox protein cut-like 1; Probably has a broad role in mammalian development as a repressor of developmentally regulated gene expression. May act by preventing binding of positively-activing CCAAT factors to promoters. Component of nf-munr repressor; binds to the matrix attachment regions (MARs) (5' and 3') of the immunoglobulin heavy chain enhancer. Represses T-cell receptor (TCR) beta enhancer function by binding to MARbeta, an ATC-rich DNA sequence located upstream of the TCR beta enhancer (By similarity). Binds to the TH enhancer; may require the basic helix-loop-helix protein T [...] | 0.894 |
| Bcl11b | Cux2 | ENSRNOP00000007602 | ENSRNOP00000001697 | BAF chromatin-remodeling complex subunit BCL11B. | Homeobox protein cut-like. | 0.663 |
| Bcl11b | Fezf2 | ENSRNOP00000007602 | ENSRNOP00000012452 | BAF chromatin-remodeling complex subunit BCL11B. | Zinc finger protein 312 (Predicted). | 0.408 |
| Bcl11b | Foxp2 | ENSRNOP00000007602 | ENSRNOP00000069190 | BAF chromatin-remodeling complex subunit BCL11B. | Forkhead box protein P2; Transcriptional repressor that may play a role in the specification and differentiation of lung epithelium. May also play a role in developing neural, gastrointestinal and cardiovascular tissues. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential (By similarity). Plays a role in synapse formation by regulating SRPX2 levels. | 0.729 |
| Bcl11b | Gad2 | ENSRNOP00000007602 | ENSRNOP00000024901 | BAF chromatin-remodeling complex subunit BCL11B. | Glutamate decarboxylase 2; Catalyzes the production of GABA. | 0.525 |
| Bcl11b | Reln | ENSRNOP00000007602 | ENSRNOP00000058574 | BAF chromatin-remodeling complex subunit BCL11B. | Reelin; Extracellular matrix serine protease that plays a role in layering of neurons in the cerebral cortex and cerebellum. Regulates microtubule function in neurons and neuronal migration. Affects migration of sympathetic preganglionic neurons in the spinal cord, where it seems to act as a barrier to neuronal migration. Enzymatic activity is important for the modulation of cell adhesion. Binding to the extracellular domains of lipoprotein receptors VLDLR and LRP8/APOER2 induces tyrosine phosphorylation of DAB1 and modulation of TAU phosphorylation (By similarity). | 0.443 |
| Bcl11b | Satb2 | ENSRNOP00000007602 | ENSRNOP00000071049 | BAF chromatin-remodeling complex subunit BCL11B. | DNA-binding protein SATB. | 0.901 |
| Bcl11b | Tbr1 | ENSRNOP00000007602 | ENSRNOP00000059530 | BAF chromatin-remodeling complex subunit BCL11B. | T-box brain transcription factor 1. | 0.912 |
| Bcl11b | Tle4 | ENSRNOP00000007602 | ENSRNOP00000074268 | BAF chromatin-remodeling complex subunit BCL11B. | Transducin-like enhancer protein 4; Transcriptional corepressor that binds to a number of transcription factors. Inhibits the transcriptional activation mediated by PAX5, and by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES. Essential for the transcriptional repressor activity of SIX3 during retina and lens development and for SIX3 transcriptional auto-repression (By similarity); Belongs to the WD repeat Groucho/TLE family. | 0.636 |
| Btbd3 | Fezf2 | ENSRNOP00000010835 | ENSRNOP00000012452 | BTB (POZ) domain containing 3 (Predicted). | Zinc finger protein 312 (Predicted). | 0.410 |
| Btbd3 | Prdm8 | ENSRNOP00000010835 | ENSRNOP00000002746 | BTB (POZ) domain containing 3 (Predicted). | PR/SET domain 8. | 0.462 |
| Cux1 | Bcl11b | ENSRNOP00000056243 | ENSRNOP00000007602 | Homeobox protein cut-like 1; Probably has a broad role in mammalian development as a repressor of developmentally regulated gene expression. May act by preventing binding of positively-activing CCAAT factors to promoters. Component of nf-munr repressor; binds to the matrix attachment regions (MARs) (5' and 3') of the immunoglobulin heavy chain enhancer. Represses T-cell receptor (TCR) beta enhancer function by binding to MARbeta, an ATC-rich DNA sequence located upstream of the TCR beta enhancer (By similarity). Binds to the TH enhancer; may require the basic helix-loop-helix protein T [...] | BAF chromatin-remodeling complex subunit BCL11B. | 0.894 |
| Cux1 | Fezf2 | ENSRNOP00000056243 | ENSRNOP00000012452 | Homeobox protein cut-like 1; Probably has a broad role in mammalian development as a repressor of developmentally regulated gene expression. May act by preventing binding of positively-activing CCAAT factors to promoters. Component of nf-munr repressor; binds to the matrix attachment regions (MARs) (5' and 3') of the immunoglobulin heavy chain enhancer. Represses T-cell receptor (TCR) beta enhancer function by binding to MARbeta, an ATC-rich DNA sequence located upstream of the TCR beta enhancer (By similarity). Binds to the TH enhancer; may require the basic helix-loop-helix protein T [...] | Zinc finger protein 312 (Predicted). | 0.610 |
| Cux1 | Foxp2 | ENSRNOP00000056243 | ENSRNOP00000069190 | Homeobox protein cut-like 1; Probably has a broad role in mammalian development as a repressor of developmentally regulated gene expression. May act by preventing binding of positively-activing CCAAT factors to promoters. Component of nf-munr repressor; binds to the matrix attachment regions (MARs) (5' and 3') of the immunoglobulin heavy chain enhancer. Represses T-cell receptor (TCR) beta enhancer function by binding to MARbeta, an ATC-rich DNA sequence located upstream of the TCR beta enhancer (By similarity). Binds to the TH enhancer; may require the basic helix-loop-helix protein T [...] | Forkhead box protein P2; Transcriptional repressor that may play a role in the specification and differentiation of lung epithelium. May also play a role in developing neural, gastrointestinal and cardiovascular tissues. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential (By similarity). Plays a role in synapse formation by regulating SRPX2 levels. | 0.733 |
| Cux1 | Reln | ENSRNOP00000056243 | ENSRNOP00000058574 | Homeobox protein cut-like 1; Probably has a broad role in mammalian development as a repressor of developmentally regulated gene expression. May act by preventing binding of positively-activing CCAAT factors to promoters. Component of nf-munr repressor; binds to the matrix attachment regions (MARs) (5' and 3') of the immunoglobulin heavy chain enhancer. Represses T-cell receptor (TCR) beta enhancer function by binding to MARbeta, an ATC-rich DNA sequence located upstream of the TCR beta enhancer (By similarity). Binds to the TH enhancer; may require the basic helix-loop-helix protein T [...] | Reelin; Extracellular matrix serine protease that plays a role in layering of neurons in the cerebral cortex and cerebellum. Regulates microtubule function in neurons and neuronal migration. Affects migration of sympathetic preganglionic neurons in the spinal cord, where it seems to act as a barrier to neuronal migration. Enzymatic activity is important for the modulation of cell adhesion. Binding to the extracellular domains of lipoprotein receptors VLDLR and LRP8/APOER2 induces tyrosine phosphorylation of DAB1 and modulation of TAU phosphorylation (By similarity). | 0.533 |
| Cux1 | Satb2 | ENSRNOP00000056243 | ENSRNOP00000071049 | Homeobox protein cut-like 1; Probably has a broad role in mammalian development as a repressor of developmentally regulated gene expression. May act by preventing binding of positively-activing CCAAT factors to promoters. Component of nf-munr repressor; binds to the matrix attachment regions (MARs) (5' and 3') of the immunoglobulin heavy chain enhancer. Represses T-cell receptor (TCR) beta enhancer function by binding to MARbeta, an ATC-rich DNA sequence located upstream of the TCR beta enhancer (By similarity). Binds to the TH enhancer; may require the basic helix-loop-helix protein T [...] | DNA-binding protein SATB. | 0.815 |
| Cux1 | Tbr1 | ENSRNOP00000056243 | ENSRNOP00000059530 | Homeobox protein cut-like 1; Probably has a broad role in mammalian development as a repressor of developmentally regulated gene expression. May act by preventing binding of positively-activing CCAAT factors to promoters. Component of nf-munr repressor; binds to the matrix attachment regions (MARs) (5' and 3') of the immunoglobulin heavy chain enhancer. Represses T-cell receptor (TCR) beta enhancer function by binding to MARbeta, an ATC-rich DNA sequence located upstream of the TCR beta enhancer (By similarity). Binds to the TH enhancer; may require the basic helix-loop-helix protein T [...] | T-box brain transcription factor 1. | 0.879 |
| Cux1 | Tle4 | ENSRNOP00000056243 | ENSRNOP00000074268 | Homeobox protein cut-like 1; Probably has a broad role in mammalian development as a repressor of developmentally regulated gene expression. May act by preventing binding of positively-activing CCAAT factors to promoters. Component of nf-munr repressor; binds to the matrix attachment regions (MARs) (5' and 3') of the immunoglobulin heavy chain enhancer. Represses T-cell receptor (TCR) beta enhancer function by binding to MARbeta, an ATC-rich DNA sequence located upstream of the TCR beta enhancer (By similarity). Binds to the TH enhancer; may require the basic helix-loop-helix protein T [...] | Transducin-like enhancer protein 4; Transcriptional corepressor that binds to a number of transcription factors. Inhibits the transcriptional activation mediated by PAX5, and by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES. Essential for the transcriptional repressor activity of SIX3 during retina and lens development and for SIX3 transcriptional auto-repression (By similarity); Belongs to the WD repeat Groucho/TLE family. | 0.652 |
| Cux2 | Bcl11b | ENSRNOP00000001697 | ENSRNOP00000007602 | Homeobox protein cut-like. | BAF chromatin-remodeling complex subunit BCL11B. | 0.663 |
| Cux2 | Fezf2 | ENSRNOP00000001697 | ENSRNOP00000012452 | Homeobox protein cut-like. | Zinc finger protein 312 (Predicted). | 0.706 |
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