STRINGSTRING
Barx2 Barx2 Coch Coch Srgap1 Srgap1 Ccdc88c Ccdc88c Csn3 Csn3 Strn3 Strn3 Csn1s1 Csn1s1 Ctu2 Ctu2 Tuba1c Tuba1c Csn2 Csn2 Ube4b Ube4b Gdpd5 Gdpd5 Glycam1 Glycam1 Map3k5 Map3k5 Gapdh Gapdh Akt1 Akt1 Bnipl Bnipl Pdcd11 Pdcd11 Akt2 Akt2 Pik3cb Pik3cb Scara3 Scara3 Pdia3 Pdia3 Rpl27a Rpl27a Nudt2 Nudt2 Pik3cg Pik3cg C2cd4b C2cd4b Jun Jun Dcp1b Dcp1b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Barx2BARX homeobox 2. (290 aa)
CochCoagulation factor C homolog (Limulus polyphemus) (Predicted), isoform CRA_a. (552 aa)
Srgap1SLIT-ROBO Rho GTPase-activating protein 1. (1085 aa)
Ccdc88cCoiled-coil domain-containing 88C. (2012 aa)
Csn3Kappa-casein; Kappa-casein stabilizes micelle formation, preventing casein precipitation in milk. (178 aa)
Strn3Striatin-3; Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein (By similarity); Belongs to the WD repeat striatin family. (794 aa)
Csn1s1Alpha-S1-casein; Important role in the capacity of milk to transport calcium phosphate. (284 aa)
Ctu2Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with CTU1/ATPBD3 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Belongs to the CTU2/NCS2 family. (528 aa)
Tuba1cDetyrosinated tubulin alpha-1C chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
Csn2Beta-casein; Important role in determination of the surface properties of the casein micelles. (231 aa)
Ube4bUbiquitination factor E4B. (1173 aa)
Gdpd5Glycerophosphodiester phosphodiesterase domain-containing 5. (610 aa)
Glycam1Glycosylation-dependent cell adhesion molecule 1; Adhesion molecule that accomplishes cell binding by presenting carbohydrate(s) to the lectin domain of L-selectin; Belongs to the PP3/GlyCAM-1 family. (146 aa)
Map3k5Mitogen-activated protein kinase kinase kinase 5. (1379 aa)
GapdhGlyceraldehyde-3-phosphate dehydrogenase; Has both glyceraldehyde-3-phosphate dehydrogenase and nitrosylase activities, thereby playing a role in glycolysis and nuclear functions, respectively. Glyceraldehyde-3-phosphate dehydrogenase is a key enzyme in glycolysis that catalyzes the first step of the pathway by converting D-glyceraldehyde 3-phosphate (G3P) into 3-phospho-D-glyceroyl phosphate. Modulates the organization and assembly of the cytoskeleton. Facilitates the CHP1-dependent microtubule and membrane associations through its ability to stimulate the binding of CHP1 to microtubu [...] (333 aa)
Akt1RAC-alpha serine/threonine-protein kinase; AKT1 is one of 3 closely related serine/threonine-protein kinases (AKT1, AKT2 and AKT3) called the AKT kinase, and which regulate many processes including metabolism, proliferation, cell survival, growth and angiogenesis. This is mediated through serine and/or threonine phosphorylation of a range of downstream substrates. Over 100 substrate candidates have been reported so far, but for most of them, no isoform specificity has been reported. AKT is responsible of the regulation of glucose uptake by mediating insulin-induced translocation of the [...] (480 aa)
BniplBCL2-interacting protein-like. (356 aa)
Pdcd11Programmed cell death 11. (1876 aa)
Akt2RAC-beta serine/threonine-protein kinase; AKT2 is one of 3 closely related serine/threonine-protein kinases (AKT1, AKT2 and AKT3) called the AKT kinases, and which regulate many processes including metabolism, proliferation, cell survival, growth and angiogenesis. This is mediated through serine and/or threonine phosphorylation of a range of downstream substrates. Over 100 substrate candidates have been reported so far, but for most of them, no isoform specificity has been reported. AKT is responsible of the regulation of glucose uptake by mediating insulin-induced translocation of the [...] (481 aa)
Pik3cbPhosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform; Phosphoinositide-3-kinase (PI3K) that phosphorylates PtdIns (Phosphatidylinositol), PtdIns4P (Phosphatidylinositol 4-phosphate) and PtdIns(4,5)P2 (Phosphatidylinositol 4,5-bisphosphate) to generate phosphatidylinositol 3,4,5-trisphosphate (PIP3). PIP3 plays a key role by recruiting PH domain-containing proteins to the membrane, including AKT1 and PDPK1, activating signaling cascades involved in cell growth, survival, proliferation, motility and morphology. Involved in the activation of AKT1 upon stimulation [...] (1070 aa)
Scara3Scavenger receptor class A, member 3 (Predicted). (606 aa)
Pdia3Protein disulfide-isomerase A3. (510 aa)
Rpl27a60S ribosomal protein L27a. (148 aa)
Nudt2Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]; Asymmetrically hydrolyzes Ap4A to yield AMP and ATP. Plays a major role in maintaining homeostasis (By similarity). (147 aa)
Pik3cgPhosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma; Belongs to the PI3/PI4-kinase family. (1102 aa)
C2cd4bC2 calcium-dependent domain-containing 4B. (340 aa)
JunTranscription factor AP-1; Transcription factor that recognizes and binds to the enhancer heptamer motif 5'-TGA[CG]TCA-3'. Promotes activity of NR5A1 when phosphorylated by HIPK3 leading to increased steroidogenic gene expression upon cAMP signaling pathway stimulation. Involved in activated KRAS-mediated transcriptional activation of USP28. Binds to the USP28 promoter. (334 aa)
Dcp1bSimilar to decapping enzyme Dcp1b (Predicted), isoform CRA_a. (582 aa)
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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