Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Bcl11b | Dcx | ENSRNOP00000007602 | ENSRNOP00000065381 | BAF chromatin-remodeling complex subunit BCL11B. | Neuronal migration protein doublecortin; Microtubule-associated protein required for initial steps of neuronal dispersion and cortex lamination during cerebral cortex development. May act by competing with the putative neuronal protein kinase DCLK1 in binding to a target protein. May in that way participate in a signaling pathway that is crucial for neuronal interaction before and during migration, possibly as part of a calcium ion-dependent signal transduction pathway. May participate along with PAFAH1B1/LIS-1 in a distinct overlapping signaling pathway that promotes neuronal migration. | 0.504 |
| Bcl11b | Emx1 | ENSRNOP00000007602 | ENSRNOP00000020786 | BAF chromatin-remodeling complex subunit BCL11B. | Similar to empty spiracles homolog 1 (Predicted). | 0.711 |
| Bcl11b | Fezf2 | ENSRNOP00000007602 | ENSRNOP00000012452 | BAF chromatin-remodeling complex subunit BCL11B. | Zinc finger protein 312 (Predicted). | 0.408 |
| Bcl11b | Foxp1 | ENSRNOP00000007602 | ENSRNOP00000013271 | BAF chromatin-remodeling complex subunit BCL11B. | Forkhead box protein P1; Transcriptional repressor. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential. Plays an important role in the specification and differentiation of lung epithelium. Acts cooperatively with FOXP4 to regulate lung secretory epithelial cell fate and regeneration by restricting the goblet cell lineage program; the function may involve regulation of AGR2. Essential transcriptional regulator of B-cell development. Involved in regulation of cardiac muscle cell proliferation. Involved in the columnar organization of spinal motor neur [...] | 0.560 |
| Bcl11b | Foxp2 | ENSRNOP00000007602 | ENSRNOP00000069190 | BAF chromatin-remodeling complex subunit BCL11B. | Forkhead box protein P2; Transcriptional repressor that may play a role in the specification and differentiation of lung epithelium. May also play a role in developing neural, gastrointestinal and cardiovascular tissues. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential (By similarity). Plays a role in synapse formation by regulating SRPX2 levels. | 0.729 |
| Bcl11b | Ppp1r1b | ENSRNOP00000007602 | ENSRNOP00000034614 | BAF chromatin-remodeling complex subunit BCL11B. | Protein phosphatase 1 regulatory subunit 1B; Inhibitor of protein-phosphatase 1. | 0.614 |
| Bcl11b | Tbr1 | ENSRNOP00000007602 | ENSRNOP00000059530 | BAF chromatin-remodeling complex subunit BCL11B. | T-box brain transcription factor 1. | 0.912 |
| Dcx | Bcl11b | ENSRNOP00000065381 | ENSRNOP00000007602 | Neuronal migration protein doublecortin; Microtubule-associated protein required for initial steps of neuronal dispersion and cortex lamination during cerebral cortex development. May act by competing with the putative neuronal protein kinase DCLK1 in binding to a target protein. May in that way participate in a signaling pathway that is crucial for neuronal interaction before and during migration, possibly as part of a calcium ion-dependent signal transduction pathway. May participate along with PAFAH1B1/LIS-1 in a distinct overlapping signaling pathway that promotes neuronal migration. | BAF chromatin-remodeling complex subunit BCL11B. | 0.504 |
| Dcx | Emx1 | ENSRNOP00000065381 | ENSRNOP00000020786 | Neuronal migration protein doublecortin; Microtubule-associated protein required for initial steps of neuronal dispersion and cortex lamination during cerebral cortex development. May act by competing with the putative neuronal protein kinase DCLK1 in binding to a target protein. May in that way participate in a signaling pathway that is crucial for neuronal interaction before and during migration, possibly as part of a calcium ion-dependent signal transduction pathway. May participate along with PAFAH1B1/LIS-1 in a distinct overlapping signaling pathway that promotes neuronal migration. | Similar to empty spiracles homolog 1 (Predicted). | 0.446 |
| Dcx | Foxp2 | ENSRNOP00000065381 | ENSRNOP00000069190 | Neuronal migration protein doublecortin; Microtubule-associated protein required for initial steps of neuronal dispersion and cortex lamination during cerebral cortex development. May act by competing with the putative neuronal protein kinase DCLK1 in binding to a target protein. May in that way participate in a signaling pathway that is crucial for neuronal interaction before and during migration, possibly as part of a calcium ion-dependent signal transduction pathway. May participate along with PAFAH1B1/LIS-1 in a distinct overlapping signaling pathway that promotes neuronal migration. | Forkhead box protein P2; Transcriptional repressor that may play a role in the specification and differentiation of lung epithelium. May also play a role in developing neural, gastrointestinal and cardiovascular tissues. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential (By similarity). Plays a role in synapse formation by regulating SRPX2 levels. | 0.417 |
| Dcx | Ppp1r1b | ENSRNOP00000065381 | ENSRNOP00000034614 | Neuronal migration protein doublecortin; Microtubule-associated protein required for initial steps of neuronal dispersion and cortex lamination during cerebral cortex development. May act by competing with the putative neuronal protein kinase DCLK1 in binding to a target protein. May in that way participate in a signaling pathway that is crucial for neuronal interaction before and during migration, possibly as part of a calcium ion-dependent signal transduction pathway. May participate along with PAFAH1B1/LIS-1 in a distinct overlapping signaling pathway that promotes neuronal migration. | Protein phosphatase 1 regulatory subunit 1B; Inhibitor of protein-phosphatase 1. | 0.408 |
| Dcx | Tbr1 | ENSRNOP00000065381 | ENSRNOP00000059530 | Neuronal migration protein doublecortin; Microtubule-associated protein required for initial steps of neuronal dispersion and cortex lamination during cerebral cortex development. May act by competing with the putative neuronal protein kinase DCLK1 in binding to a target protein. May in that way participate in a signaling pathway that is crucial for neuronal interaction before and during migration, possibly as part of a calcium ion-dependent signal transduction pathway. May participate along with PAFAH1B1/LIS-1 in a distinct overlapping signaling pathway that promotes neuronal migration. | T-box brain transcription factor 1. | 0.642 |
| Emx1 | Bcl11b | ENSRNOP00000020786 | ENSRNOP00000007602 | Similar to empty spiracles homolog 1 (Predicted). | BAF chromatin-remodeling complex subunit BCL11B. | 0.711 |
| Emx1 | Dcx | ENSRNOP00000020786 | ENSRNOP00000065381 | Similar to empty spiracles homolog 1 (Predicted). | Neuronal migration protein doublecortin; Microtubule-associated protein required for initial steps of neuronal dispersion and cortex lamination during cerebral cortex development. May act by competing with the putative neuronal protein kinase DCLK1 in binding to a target protein. May in that way participate in a signaling pathway that is crucial for neuronal interaction before and during migration, possibly as part of a calcium ion-dependent signal transduction pathway. May participate along with PAFAH1B1/LIS-1 in a distinct overlapping signaling pathway that promotes neuronal migration. | 0.446 |
| Emx1 | Fezf2 | ENSRNOP00000020786 | ENSRNOP00000012452 | Similar to empty spiracles homolog 1 (Predicted). | Zinc finger protein 312 (Predicted). | 0.648 |
| Emx1 | Foxp2 | ENSRNOP00000020786 | ENSRNOP00000069190 | Similar to empty spiracles homolog 1 (Predicted). | Forkhead box protein P2; Transcriptional repressor that may play a role in the specification and differentiation of lung epithelium. May also play a role in developing neural, gastrointestinal and cardiovascular tissues. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential (By similarity). Plays a role in synapse formation by regulating SRPX2 levels. | 0.503 |
| Emx1 | Ntsr1 | ENSRNOP00000020786 | ENSRNOP00000035997 | Similar to empty spiracles homolog 1 (Predicted). | Neurotensin receptor type 1; G-protein coupled receptor for the tridecapeptide neurotensin (NTS). Signaling is effected via G proteins that activate a phosphatidylinositol-calcium second messenger system. Signaling leads to the activation of downstream MAP kinases and protects cells against apoptosis (By similarity). | 0.439 |
| Emx1 | Tbr1 | ENSRNOP00000020786 | ENSRNOP00000059530 | Similar to empty spiracles homolog 1 (Predicted). | T-box brain transcription factor 1. | 0.834 |
| Fezf2 | Bcl11b | ENSRNOP00000012452 | ENSRNOP00000007602 | Zinc finger protein 312 (Predicted). | BAF chromatin-remodeling complex subunit BCL11B. | 0.408 |
| Fezf2 | Emx1 | ENSRNOP00000012452 | ENSRNOP00000020786 | Zinc finger protein 312 (Predicted). | Similar to empty spiracles homolog 1 (Predicted). | 0.648 |
page 1 of 3